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Constitutive and inducible defensive metabolites in Hordeum species and wheat

宇部 尚樹 鳥取大学

2020.03.13

概要

(様式第13号)

学 位 論 文 要 旨

氏名: 宇部 尚樹

題目: Constitutive and inducible defensive metabolites in Hordeum species and wheat

(オオムギ属植物とコムギにおける構成的および誘導性防御物質に関する研究)

Plants possess chemical defense systems to protect themselves against biotic stresses.
Antifungal compounds in plants, such as phytoanticipins and phytoalexins, contribute to the
rejection of pathogen infection. Phytoanticipins are defined as low molecular weight,
antimicrobial compounds that are present in plants before challenge by microorganisms or are
produced after infection solely from preexisting constituents. On the other hand, phytoalexins
are defined as low molecular weight, antimicrobial compounds produced by plants in response
to pathogen attack, and provide a chemical barrier against the invasion of pathogen.
In general, closely related species accumulate similar specialized metabolites. However,
in the genus Hordeum (Poaceae), which includes cultivated barley (Hordeum vulgare ssp.
vulgare), the occurrence of multiple defensive metabolites such as hordatines, benzoxazinones
(Bxs), and gramine has been reported. Hordeum species are classified into four clades, H, Xu,
Xa, and I. The H and Xu clades comprise a monophyletic group, while the I and Xa clades form
a separate monophyletic group. However, the correlation between phylogeny and the
distribution of defensive specialized metabolites in Hordeum has not been clarified. To reveal
the evolutionary changes in secondary metabolism in the genus Hordeum, the presence or
absence of defensive specialized metabolites was analyzed in representative Hordeum species in
all four clades. In the H clade, Hordeum vulgare accumulated hordatines but not Bxs, whereas H.
bulbosum accumulated neither compound. H. vulgare ssp. vulgare ‘Shurai’, H. vulgare ssp.
spontaneum, and H. murinum ssp. leporinum accumulated gramine at high concentrations, while
several species in I clade also accumulated it at low concentrations. Species in the clades I and
Xa accumulated Bxs without hordatines. In H. murinum, a Xu clade species, neither hordatines
nor Bxs were detected. Two hitherto undescribed compounds were found to commonly
accumulate in H. bulbosum in the H clade and in H. murinum in the Xu clade. On the basis of
spectroscopic analyses, they were identified as dehydrodimers of feruloylagmatine and were
designated murinamides A and B. These compounds showed antifungal activities against
pathogenic fungi, indicating their defensive roles. As hordatines are also dehydrodimers of
phenylamides with agmatine, both the H and Xu clade species are considered to accumulate the
same class of compounds. Thus, when the H/Xu clades split from the I/Xa clades during
evolution, the defensive metabolism shifted from the synthesis of Bxs to the synthesis of
dehydrodimers of phenylamides with agmatine plus gramine in the H/Xu clades.
Plants often activate multiple specialized metabolic pathways upon pathogen infection.
Poaceae species such as rice and maize accumulate phytoalexins with diverse chemical
structures including phenylamides, flavonoids, and terpenoid. On the other hands, in barley and
wheat, inducible defensive systems with specialized metabolites remain to be elucidated while
representative phytoanticipins such as hordatines and Bxs, respectively, have been identified.
Changes in specialized metabolites were analyzed in wheat leaves inoculated with Bipolaris

sorokiniana, the causal agent of spot blotch in Poaceae species. HPLC analysis detected the
accumulation of six compounds in B. sorokiniana-infected leaves. Of these, we purified two
compounds by silica gel and ODS column chromatography and preparative HPLC, and then
identified them as cinnamic acid amides, N-cinnamoyl-9-hydroxy-8-oxotryptamine and
N-cinnamoyl-8-oxotryptamine, by spectroscopic analyses. We named these compounds
triticamides A and B, respectively. The remaining four compounds were predicted to be
p-coumaric acid amides of hydroxyputrescine, hydroxyagmatine, hydroxydehydroagmatine, and
agmatine by mass spectrometry. To examine the localization of triticamides A and B in
pathogen-inoculated leaves, lesioned and healthy tissues were extracted separately and
subjected to HPLC analysis. Triticamides were detected at high concentrations in the lesioned
tissue of the leaves. The accumulation of two cinnamic acid amides was also induced by
Fusarium graminearum infection, and by treatment with CuCl2, jasmonic acid, and
isopentenyladenine. Antifungal activity of these amides was demonstrated by inhibition of
conidial germination and germ tube elongation of pathogenic fungi, such as Fusarium
graminearum and Alternaria brassicicola, thus indicating that they act as phytoalexins. The
accumulation of these amides was also detected in barley leaves treated with CuCl2. We
examined the accumulation of 25 phenylamides in B. sorokiniana-infected wheat leaves using
LC-MS/MS. Hydroxycinnamic acid amides of tryptamine, serotonin, putrescine, and agmatine
were induced after infection with B. sorokiniana. Thus, the induced accumulation of two groups
of phenylamides, cinnamic acid amides with indole amines and p-coumaric acid amides with
putrescine- and agmatine-related amines, represents a major metabolic response of wheat to
pathogen infection.
Metabolic changes in pathogen-infected barley were examined in addition to those in
wheat. HPLC analysis detected the induced accumulation of three compounds in barley roots
challenged by Fusarium culmorum, the causal agent of Fusarium root rot. The three compounds
were identified as triticamides A and B, and N-cinnamoyl-(1H-indol-3-yl)methylamine, which
we named triticamide C, by spectroscopic analysis. Triticamides A and B were also detected in
wheat, whereas triticamide C was detected only in barley. On the basis of their antimicrobial
activities, triticamides function as phytoalexins in barley. The accumulation of 25 phenylamides
in pathogen-infected root and leaves were also examined using LC-MS/MS. Accumulation of
phenylamides with putrescine, agmatine, tyramine, tryptamine, and serotonin was induced in the
pathogen-infected barley. The administration of deuterium-labeled N-cinnamoyl tryptamine
(CinTry) to barley roots resulted in the effective incorporation of the compound into triticamides
A and B, which suggested that they were synthesized through the oxidation of CinTry. Nine
putative tryptamine hydroxycinnamoyl transferase (THT)-encoding genes (HvTHT1–HvTHT9)
were identified by database search on the basis of homology to known THT gene sequences in
rice. Since HvTHT7 and HvTHT8 had the same sequences except one nucleotide, we measured
their expression levels in total by RT-qPCR. HvTHT7/8 were markedly upregulated in F.
culmorum-infected root and B. sorokiniana-infected leaves. The HvTHT7 and HvTHT8
enzymes preferred cinnamoyl- and feruloyl-CoAs as acyl donors and tryptamine as an acyl
acceptor, and (1H-indol-3-yl)methylamine was also accepted as an acyl acceptor. These findings
suggested that HvTHT7/8 are responsible for the induced accumulation of triticamides in barley.
In the present study, we found that barley and its related species in H and Xu clades in
the genus Hordeum accumulate HCAA dimers as phytoanticipins, whereas the species in I and
Xa clades accumulate Bxs in common with wheat. This distribution of different classes of
compounds suggests great metabolic changes that occurred in the evolution of species in H and
Xu clades. On the other hand, barley and wheat accumulated common phenylamide
phytoalexins, triticamides, in response to pathogen attacks. As these compounds have not been
described in other species to the best of our knowledge, triticamides are considered to be
characteristic compounds in these species. These differences and similarities of defensive
specialized metabolites among Triticeae species are considered to be a reflection of
“scrap-and-build” in specialized metabolism, which has occurred in evolution of Triticeae
species for survival under varying biological stresses.

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参考文献

Gorzolka, K., Bednarz, H., Niehaus, K., 2014. Detection and localization of novel

hordatine-like compounds and glycosylated derivatives of hordatines by

imaging mass spectrometry of barley seeds. Planta 239, 1321-1335.

Pihlava, J.M., 2014. Identification of hordatines and other phenolamides in barley

(Hordeum vulgare) and beer by UPLC-QTOF-MS. J. Cereal Sci. 60, 645-652.

Wakimoto, T., Nitta, M., Kasahara, K., Chiba, T., Ye, Y., Tsuji, K., Kan, T., Nukaya, H.,

Ishiguro, M., Koike, M., Yokoo, Y., Suwa, Y., 2009. Structure–activity

relationship study on a1 adrenergic receptor antagonists from beer. Bioorganic

Med. Chem. Lett. 19, 5905-5908.

109

Table 2.S1. Accumulation of p-coumaroylagmatine, feruloylagmatine, hordatines A and

B, gramine, and DIBOA-Glc in the Hordeum species.Data are means with standard

deviation (SD) from three independent

Species (days after sowing)

H. vulgare ssp. vulgare cv. Sachiho Golden (7)

H. vulgare ssp. vulgare cv. Shunrai (6)

H. vulgare ssp. spontaneum (5)

H. bulbosum (- )

H. murinum ssp. glaucum (8)

H. murinum ssp. leporinum (4)

H. marinum (5)

H. bogdanii (8)

H. jubatum (4)

H. brachyantherum (6)

H. chilense (8)

H. flexousum (10)

H. pusillum (12)

Species (days after sowing)

H. vulgare ssp. vulgare cv. Sachiho Golden (7)

H. vulgare ssp. vulgare cv. Shunrai (6)

H. vulgare ssp. spontaneum (5)

H. bulbosum (- )

H. murinum ssp. glaucum (8)

H. murinum ssp. leporinum (4)

H. marinum (5)

H. bogdanii (8)

H. jubatum (4)

H. brachyantherum (6)

H. chilense (8)

H. flexousum (10)

H. pusillum (12)

Species (days after sowing)

H. vulgare ssp. vulgare cv. Sachiho Golden (7)

H. vulgare ssp. vulgare cv. Shunrai (6)

H. vulgare ssp. spontaneum (5)

H. bulbosum (- )

H. murinum ssp. glaucum (8)

H. murinum ssp. leporinum (4)

H. marinum (5)

H. bogdanii (8)

H. jubatum (4)

H. brachyantherum (6)

H. chilense (8)

H. flexousum (10)

H. pusillum (12)

p -Coumaroylagmatine

(nmol/gFW)

Shoot

Root

1110 (±358)

383 (±213)

623 (±34.1)

721 (±64.0)

1590 (±224)

462 (±71.4)

26.7 (±1.41)

6.11 (±2.12)

n.d.

95.0 (±28.3)

211 (±17.5)

70.2 (±8.39)

40.6 (±8.00)

13.4 (±4.00)

61.1 (±48.2)

144 (±14.7)

9.8 (±2.46)

3.16 (±2.55)

n.d.

34.6 (±44.2)

31.7 (±9.70)

n.d.

16.6 (±4.10)

n.d.

n.d.

n.d.

Hordatine A

(nmol/gFW)

Shoot

2470 (±1110)

1540 (±16.7)

2230 (±99.3)

n.d.

n.d.

n.d.

n.d.

n.d.

n.d.

n.d.

n.d.

n.d.

n.d.

Hordatine B

(nmol/gFW)

Root

372 (±48.3)

243 (±23.2)

292 (±44.2)

n.d.

n.d.

n.d.

n.d.

n.d.

n.d.

n.d.

n.d.

n.d.

n.d.

Gramine

(nmol/gFW)

Shoot

n.d.

928 (±132)

251 (±113)

9.27 (±8.82)

n.d.

771 (±25.2)

n.d.

n.d.

19.9 (±14.6)

n.d.

n.d.

n.d.

n.d.

Root

n.d.

n.d.

n.d.

14.1 (±11.6)

n.d.

11.0 (±7.26)

n.d.

32.3 (±26.9)

10.2 (±4.96)

51.8 (±9.29)

26.0 (±4.53)

n.d.

13.0 (±2.38)

n.d.: not detected

Young shoots and roots emerged from bulbs of H. bulbosum were extracted.

110

Feruloylagmatine

(nmol/gFW)

Shoot

Root

n.d.

n.d.a

n.d.

n.d.

n.d.

n.d.

9.77 (±1.37)

6.74 (±2.00)

173 (±32.1)

793 (±35.1)

1760 (±121)

327 (±104)

n.d.

n.d.

n.d.

n.d.

n.d.

n.d.

n.d.

n.d.

n.d.

n.d.

n.d.

n.d.

n.d.

n.d.

Shoot

531 (±190)

300 (±6.87)

300 (±7.87)

n.d.

n.d.

n.d.

n.d.

n.d.

n.d.

n.d.

n.d.

n.d.

n.d.

Root

286 (±74.2)

91.1 (±13.1)

83.6 (±12.7)

n.d.

n.d.

n.d.

n.d.

n.d.

n.d.

n.d.

n.d.

n.d.

n.d.

DIBOA-Glc

(nmol/gFW)

Shoot

n.d.

n.d.

n.d.

n.d.

n.d.

n.d.

434 (±74.0)

2120 (±1120)

1030 (±414)

1940 (±370)

2450 (±638)

126 (±10.9)

315 (±43.0)

Root

n.d.

n.d.

n.d.

n.d.

n.d.

n.d.

2770 (±1580)

2990 (±307)

2970 (±252)

1820 (±322)

1260 (±227)

348 (±77.8)

55 (±45.8)

Table 2.S2. Hordeum species used in this study.

Species

H. vulgare L. ssp. vulgare

H. vulgare L. ssp. vulgare

H. vulgare L. ssp. spontaneum (C. Koch.) Thell.

H. bulbosum L.

H. murinum ssp. glaucum (Steudel.) Tzvelev.

H. marinum ssp. marinum Hudson.

H. chilense Roem. & Schult.

H. brachyantherum Nevski.

ssp. californicum (Cov. & Steb.) Both. & et al.

H. bogdanii Wil.

H. flexuosum Steud.

H. pusillum Nutt.

H. murinum L. spp. leporinum (Link.) Arcang.

H. jubatum L.

Ploidy

2x

2x

2x

2x

Accession

2x

2x

2x

cv. Sachiho Golden

cv. Shunrai

OUH602

Cb2920/4

JIC line 1

H109

JIC line 1

Collection site

Japanese commercial cultivar

Japanese commercial cultivar

unknown

unknown (obtained from W.G. Thompson & Sons, Canda)

unknown (obtained from John Innes Centre: JIC)

Greece: Cyclades, Milos

unknown (obtained from JIC)

2x

2x

2x

2x

4x

4x

H3317

H4014

H1116

H2038

H509

H 1922

USA: California, Ventura co

Pakistan: Gilgit, Nagar valley

Argentina: prov. Buenos Aires

USA: New Mexico

Spain: 1-2 km W Estepona

USA: New Mexico, E Santa Fe

111

Table 2.S3. 1H (600 MHz) and

13

C (150 MHz) NMR spectral data for hordatine C in

methanol-d4

Hordatine C (3)

Position

10

11

H muti, J (Hz)

7.00 (1H, s)

7.16 (1H, s)

7.45 (1H, d, 15.7)

6.47 (1H, d, 15.7)

3.31-3.34 (2H, m)

1.63 (4H, m)

12

13

14

3.12-3.22 (2H, m)

MeO-C3

3.90 (3H, s)

1'

13

130.5

118.3

146.2

151.4

129.5

112.8

141.8

119.5

169.2

40.0

27.8

27.2

42.1

158.7

56.8

132.6

2'

6.93 (1H, s)

110.5

3'

149.3

4'

5'

148.2

116.4

6.79 (2H, bs)

6'

120.0

7'

5.94 (1H, d, 8.2)

90.0

8'

4.22 (1H, d, 8.2)

58.7

9'

10'

11'

12'

13'

3.31-3.34 (2H, m)

1.60 (4H, m)

3.12-3.22 (2H, m)

14'

MeO-C3'

a-e

3.82 (3H, s)

173.2

39.8

27.8

27.2

42.0

158.6

56.4

Assignments may be interchanged.

112

Fig. 2.S1. HPLC charts of the reaction mixtures after peroxidase reactions in acidic (A)

and basic (B) conditions. FA, feruloylagmatine; MA, murinamide A; MB, murinamide B;

HC, hordatine C.

Fig. 2.S2. HMBC (indicated by arrows from

lines) correlations for hordatine C.

113

13

C to 1H) and COSY (indicated by bold

Fig. 2.S3. Optical resolution of murinamide A. Murinamide A was separated into two

peaks by chiral HPLC (A). CD spectra of enantiomers corresponding to the two peaks

were recorded (B).

Fig. 2.S4. Optical resolution of murinamide B. Murinamide B was separated into two

peaks by chiral HPLC (A). CD spectra of enantiomers corresponding to the two peaks

were recorded (B).

114

Fig. 2.S5. Scheme for the generation of murinamides A, B, and hordatine C in peroxidase

reactions.

115

Chapter 3

Fig. 3.S1. Fragmentation of 3–6 in LC-MS/MS analysis.

116

Chapter 4

Amount (nmol/gFW)

600

500

400

300

200

100

n.d. n.d. n.d.

2.0

n.d.

Control

Inoculation

Fig.roots

S1

Fig. 4.S1. Accumulation of compounds 1–3 in Fusarium culmorum-infected wheat

at 72 h after inoculation. Values and error bars represent mean ± SD (n=3). n.d., not

detected.

117

HvTHT1

HvTHT3

HvTHT5

HvTHT9

Inoculation

Control

Relative expression (DDCt)

Relative expression (DDCt)

10

HvTHT2

HvTHT4

HvTHT6

48

72

Hours after inoculation

48

72

Hours after inoculation

Fig. 4.S2. Effects of Fusarium culmorum infection on the expression of HvTHT genes in

barley roots. Total RNA were extracted 48 h and 72 h after inoculation. expression levels

were normalized using the ADP-ribosylation factor-like protein (ADP) gene as an inner

control and are expressed as relative values compared to those of control roots and leaves.

Values and error bars represent mean ± SD (n=3).

118

Fig. 4.S3. Sequence analyses of HvTHT7/8 fragments amplified from cDNA of F.

culmorum-infected barley ‘Shunrei’ roots and from the genomic DNA of ‘Shunrei’ and

‘Morex’. The green, red, black, and blue lines indicated A, T, G, and C, respectively. The

letters above the waves indicated nucleotides around the single nucleotide substitution

site of HvTHT7/8 (490-500 bp from the start codon).

119

(kDa)

230

(kDa) M

230

140

140

95

95

70

70

45

45

32

32

Fig. 4.S4. SDS-PAGE analysis of recombinant HvTHT2, HvTHT7 and HvTHT8.

Fig. S2

Proteins from each purification step were separated by SDS-PAGE on an 8.5% gel and

stained with Coomassie Brilliant Blue R-250. (A) Lane M, Molecular marker; Lane 1,

crude E. coli extract; Lane 2, crude extract of HvTHT7-expressing E. coli; Lane 3, crude

extract of HvTHT8-expressing E. coli; Lane 4, HvTHT7 purified by metal-affinity

chromatography; Lane 5, HvTHT8 purified by metal-affinity chromatography. (B) Lane

M, Molecular marker; Lane 1, crude E. coli extract; Lane 2, crude extract of HvTHT2expressing E. coli; Lane 3, HvTHT2 purified by metal-affinity chromatography.

Arrowheads indicate HvTHT proteins.

120

[GENETYX-MAC: Multiple-Alignment]

Date

: 2019.08.19

HvTHT2

HvTHT7

HvTHT8

1 ---------MAVMVEITQSMVLEPSKESAR-GGGKKVPLIVFDRASTDGYIPAVFAWNAP

1 MEVNHAEAGRQVAAATSRIAMLKPVYAAPHPLAGGKVQLSVFDRAAIDTYVPIVLAYPAP

1 MEVNHAEAGRQVAAATSRIAMLKPVYAAPHPLAGGKVQLSVFDRAAIDTYVPIVLAYPAP

50

60

60

HvTHT2

HvTHT7

HvTHT8

51 APTNAALKAGLVAAVARFPHLAGRFAADDHGRKCFHLNDAGVLVVEATADADLADALAHD

61 APSNEALKEGLLRAIAPYPHLLGRFALDAHGRRVLHLNNEGVLVIEADVPADLADVLAAG

61 APSNEALKEGLLRAIAPYPHLLGRFALDAHGRRVLHLNNEGVLVIEADVPADLADVLAAG

110

120

120

HvTHT2

HvTHT7

HvTHT8

111 -VSAHINELYPKAE--KERANEPIFQAQLTRYACGGLVIGTACHHQVADGQSMSVFYTAW

121 GMTTDVDGFYPSVPDPEESIGAALLQVKLSRYRCGGLLLGVICHHHIADGHAASTFYGAW

121 GMTTDVDGFYPSVPDPEESIGAALLQVKLSRYRCGGLLLGVICHHRIADGHAASTFYGAW

167

180

180

HvTHT2

HvTHT7

HvTHT8

168 ASAVRTDS-AVLPSPFVDRSATVVPRSPPKPAYDHRNIEFKG-ELS-WSHSYGVLPMDRI

181 ATAVREGKGFIVPSPFIDRAATAVPRRTPKPVFDHRSIEFKGGEGSGSSQSDALLPMDKI

181 ATAVREGKGFIVPSPFIDRAATAVPRRTPKPVFDHRSIEFKGGEGSGSSQSDALLPMDKI

224

240

240

HvTHT2

HvTHT7

HvTHT8

225 KNLAVHFPDEFVADLKARVGTRCSTFQCLLAHAWKKITAARDLAPDDFTQVRVAVNCRGR

241 KNITVNFTAEFMAELRSRVGARCSTFQCLLAHVWKKMTAARGLSPEEFTQVRVAVNCRGR

241 KNITVNFTAEFMAELRSRVGARCSTFQCLLAHVWKKMTAARGLSPEEFTQVRVAVNCRGR

284

300

300

HvTHT2

HvTHT7

HvTHT8

285 AKPPVPMDFFGNMVLWAFPRMQVRDLLSSSYPAVVGAIRDAVALVDDEYIQSFIDFGEAE

301 ANPPVSMDFFGNMVLWAFPRLQVRDVLGLSYGGVVGAIRDAAARIDDEYVQSFVDFG--301 ANPPVSMDFFGNMVLWAFPRLQVRDVLGLSYGGVVGAIRDAAARIDDEYVQSFVDFG---

344

357

357

HvTHT2

HvTHT7

HvTHT8

345 RGVIEDGGEELASTAATPGTMFCPDLEVDSWLGFRFHDLDFGCGPPCAFLPPDLPIEGIM

358 -GVADANGEELEATS-TCGTMLCPDVEVDSWLGFRFHQLDFGTGPPSAFLPAGLPVEGMM

358 -GVADANGEELEATS-TCGTMLCPDVEVDSWLGFRFHQLDFGTGPPSAFLPAGLPVEGMM

404

415

415

HvTHT2

HvTHT7

HvTHT8

405 IFVPSCDPKGGVDLFMALDDEHVQAFKQICYSMD------416 VFVPSRTVKGSVDLFMALAEDHVAPFNKICYSLDDILPSRM

416 VFVPSRTVKGSVDLFMALAEDHVAPFNKICYSLDDILPSRM

438

456

456

HvTHT2

HvTHT7

HvTHT8 3844802560

60

Clade IV specific motif

60

Clade IVb specific motif 2245254593

Fig.green

S3

Fig. 4.S5. Amino acid sequences of HvTHT2, HvTHT7, and HvTHT8. The red and

squares indicate clade IV and IVb specific motifs, respectively. The HvTHT amino-acid

sequences

were

obtained

from

the

EnsemblPlants

(http://plants.ensembl.org/Hordeum_vulgare/Info/Index?db=core).

121

database

Td VAH02175.1

Td VAH02174.1

Os EMS45123.1

Td VAH14257.1

At XP 020190590.1

At XP 020178719.1

Td VAH14255.1

98 Td VAH14254.1

Hv

BAK02716.1

100

98 HvTHT2

Hv BAJ87102.1

HvTHT1

99

Hv BAJ88765.1

Bd XP 003573858.1

At XP 020199658.1

At XP 020199659.1

100

OsTHT1

Os EAZ15901.1

96

Os EAY78283.1

99

99 OsTHT2

Ec TVU30867.1

99

100

82

Ec TVU30870.1

Ec TVU30872.1

Ec TVU30874.1

Ec TVU30868.1

100 Si XP 004983082.1

86

Sv TKV93787.1

100

Do OEL19803.1

Ph XP 025796721.1

Ph PUZ39302.1

100

100 Zm PWZ03970.1

Zm XP 008660165.1

Si XP 004983083.1

Do OEL23732.1

Pm RLN40415.1

70

100 Ph XP 025795237.1

97 Ph PUZ39301.1

100 OsTBT2

Os EEE52439.1

Os EEC80004.1

100

OsTBT1

Ph XP 025822129.1

100 Pm RLM60430.1

99

Ph PUZ50410.1

Si XP 022683316.1

100 Ec TVU03993.1

100

Ec TVU30673.1

Ec TVU14391.1

Ec TVU48139.1

Ec TVU48140.1

100 Zm XP 008651745.1

Zm PWZ52172.1

Zm NP 001169239.1

100 Zm PWZ53015.1

Pm RLN41179.1

Do OEL33133.1

98 Ph PUZ42490.1

Os XP 025796428.1

Ph PUZ42491.1

84

Ph XP 025797757.1

100

Os EAY88823.1

100 Os XP 015628429.1

90 Os EEE58457.1

Td VAI71351.1

100

At XP 020153017.1

93 Td VAH86895.1

Tu EMS62369.1

Td VAI09672.1

73

Sc Sc7Loc00232724.1

At XP 020161644.1

HvTHT7

100 HvTHT8

89

Tu EMS56126.1

Ta SPT20965.1

100 At XP 020175076.1

94

Bd KQK23232.2

Bd XP 003561973.1

Bd XP 003561971.1

100 Td VAH54698.1

Td VAH54696.1

At XP 020161589.1

Td VAI60492.1

87

Td VAI49066.1

Hv BAJ86667.1

100

99 HvTHT9

Sc Sc0Loc01500399.1

93 Td VAH54943.1

82

Td VAH54935.1

HvTHT3

HvTHT4

100 97

Hv BAJ96372.1

At XP 020159900.1

At XP 020173923.1

Sc Sc2Loc01351693.2

Tu EMS65979.1

83 Td VAH39395.1

98 Td VAH39396.1

Bd XP 024319164.1

Bd XP 024319153.1

100 Bd KQK23251.1

Tu EMS67449.1

99

93

Sc Sc0Loc00288053.2

At XP 020180976.1

Td VAI09673.1

At XP 020161647.1

79

HvTHT6

Td VAI09669.1

At XP 020171415.1

98 Hv BAJ87520.1

95

HvTHT5

Sc c7Loc01227566.2

At XP 020183041.1

99

Td VAI09671.1

Td VAH86892.1

80

98 Td VAH86891.1

94

74

77

0.05

122

Fig. 4.S6. Relationships between HvTHT proteins and HvTHT like proteins from various

species. A dendrogram was generated form sequences of 115 HvTHT like proteins.

Bootstrap values >70% (based on 1,000 replications) are indicated at each node (bar =

0.05 amino acid substitutions per site). Protein sequences were obtained from GenBank

(https://blast.ncbi.nlm.nih.gov/Blast.cgi) and IPK Rye Blast Server (https://webblast.ipkgatersleben.de/ryeselect/). Abbreviation of species before the accession number were as

follows: At (Aegilops tauschii), Bd (Brachypodium distachion), Do (Dichanthelium

oligosanthes), Ec (Eragrostis curvula), Hv (Hordeum vulgare), Os (Oryza sativa), Ph

(Panicum hallii), Pm (Panicum miliaceum), Sc (Secale cereale), Si (Setaria italica), Sv

(Setaria viridis), Ta (Tirticum aestivum), Td (Triticum durum), Tu (Triticum urartu), Zm

(Zea mays). Accession number of OsTHTs OsTBTs were as follow: OsTHT1

(XP_015613139.1), OsTHT2 (XP_015612968.1), OsTBT1 (XP_015615935.1), and

OsTBT2 (XP_015615816.1). The HvTHT amino-acid sequences were obtained from the

EnsemblPlants

database

(http://plants.ensembl.org/Hordeum_vulgare/Info/Index?db=core).

Red

arrowheads

indicate HvTHT2, HvTHT7, HvTHT8, OsTHT1, OsTHT2, OsTBT1, and OsTBT2.

123

Table 4.S1. HvTHT genes detected by a search on the database, EnsemblPlants

(http://plants.ensembl.org/Hordeum_vulgare/Info/Index?db=core).

Gene

Gene code

HvTHT1

Similarity of amino acid sequnece (%)

OsTBT1

OsTBT2

OsTHT1

OsTHT2

HORVU1Hr1G019380

78.7

77.7

86.3

87.1

HvTHT2

HORVU1Hr1G019410.1

78.5

78.1

85.9

87.0

HvTHT3

HORVU2Hr1G125270.1

81.2

80.5

78.4

78.6

HvTHT4

HORVU2Hr1G125370.1

80.9

80.4

79.1

79.3

HvTHT5

HORVU4Hr1G077680.11

73.9

73.1

72.7

73.6

HvTHT6

HORVU4Hr1G077720.8

80.8

80.4

80.1

81.0

HvTHT7

HORVU4Hr1G077780.1

80.7

80.0

77.9

79.5

HvTHT8

HORVU4Hr1G077790

80.6

79.9

77.9

79.5

HvTHT9

HORVU6Hr1G073010.3

80.8

78.7

78.7

78.9

124

Table 4.S2. Sequences of primers.

Name

Sequence (5’-3’)

qRT-PCR

HvTHT1 -F

CATGTCCAGCAGCTACCCGA

HvTHT1 -R

GCCAAAGTCAACAAACGACTG

HvTHT2 -F

CCTGTCCAGCAGTTACCCAG

HvTHT2 -R

HvTHT3 -F

CCCGAAGTCGATAAACGACTG

CAGATTGACTTCGGCGCC

HvTHT3 -R

GAGTAGAAGGTCGCCGTGTC

HvTHT4 -F

Used HvTHT3 -F

HvTHT4 -R

CACAAGTAACGCGTGTCATGATC

HvTHT5 -F

HvTHT5 -R

GGCTCATGATCTTCATGCCA

CAAGGGATTCCGGTGGTGTC

HvTHT6 -F

GAACGCATCGACGACGAGTA

HvTHT6 -R

CTATCCACCTCTGCGTCCG

HvTHT7/8 -F

GGATGATGGTCTTCGTGCC

HvTHT7/8 -R

HvTHT9 -F

GCAAATCTTGTTGAATGGCG

GATGCTGCGTACATCCAGTC

HvTHT9 -R

AGACTGCTGTCCACCTCCAG

ADP -F

GCTCTCCAACAACATTGCCAAC

ADP -R

GAGACATCCAGCATCATTCATTCC

Cloning of HvTHT

HvTHT8/pGST -F

CTGTTCCAGGGCCCGATGGAGGTTAACCACGCTGA

HvTHT8/pGST -R

TTCGGATCCCTCGAGTTACATCCTGGATGGGAGGA

HvTHT2/pGST -F

HvTHT2/pGST -R

CTGTTCCAGGGCCCGATGGCAGTGATGGTGGAGAT

TTCGGATCCCTCGAGTTAGTCCATTGAGTAGCAGATCTG

HvTHT7/pGST -F

CACCACCACATCGCCGACGGCCACGC

HvTHT7/pGST -R

GGCGATGTGGTGGTGGCATATCACGC

pGST inverse-F

pGST inverse-R

CTCGAGGGATCCGAATTCAA

CGGGCCCTGGAACAGAACTTC

125

Table 4.S3. MRM conditions for triticamides and related compounds.

Compound

Precursor ion Product ion

Cone voltage Collision energy

m/z

m/z

eV

Cinnamoyltryptamine

291.16

130.92

20

18

Cinnamoyl-9-hydroxy-8-oxotryptamine (1)

321.01

303.06

10

Cinnamoyl-8-oxotryptamine (2)

305.03

130.90

25

18

Cinnamoyl-(1H -Indol-3-yl)methylamine (3)

277.06

129.98

20

10

Tryptamine

161.02

143.93

16

10

8-Oxotryptamine

175.07

157.13

15

10

(1H -Indol-3-yl)methylamine

147.03

129.97

1-phenyl-d 5

326.01

308.06

10

2-phenyl-d 5

310.03

135.90

25

18

For detection of deuterium labeled phenylamides

126

...

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