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Application of plant specialized metabolites to modulate soil microbiota

Sugiyama, Akifumi 京都大学 DOI:10.5511/plantbiotechnology.23.0227a

2023.06.25

概要

Plant specialized metabolites (PSMs) are considerably diverse compounds with multifaceted roles in the adaptation of plants to various abiotic and biotic stresses. PSMs are frequently secreted into the rhizosphere, a small region around the roots, where they facilitate interactions between plants and soil microorganisms. PSMs shape the host-specific rhizosphere microbial communities that potentially influence plant growth and tolerance to adverse conditions. Plant mutants defective in PSM biosynthesis contribute to reveal the roles of each PSM in plant–microbiota interactions in the rhizosphere. Recently, various approaches have been used to directly supply PSMs to soil by in vitro methods or through addition in pots with plants. This review focuses on the feasibility of the direct PSM application methods to reveal rhizospheric plant–microbiota interactions and discusses the possibility of applying the knowledge gained to future engineering of rhizospheric traits.

参考文献

Bano S, Wu X, Zhang X (2021) Towards sustainable agriculture:

Rhizosphere microbiome engineering. Appl Microbiol Biotechnol

105: 7141–7160

Ben Mrid R, Benmrid B, Hafsa J, Boukcim H, Sobeh M, Yasri A

(2021) Secondary metabolites as biostimulant and bioprotectant

agents: A review. Sci Total Environ 777: 146204

Blazevic I, Montaut S, Burcul F, Olsen CE, Burow M, Rollin

P, Agerbirk N (2020) Glucosinolate structural diversity,

identification, chemical synthesis and metabolism in plants.

Phytochemistry 169: 112100

Buckley S, Brackin R, Näsholm T, Schmidt S, Jämtgård S (2022) The

influence of sucrose on soil nitrogen availability: A root exudate

simulation using microdialysis. Geoderma 409: 115645

Canto CD, Simonin M, King E, Moulin L, Bennett MJ, Castrillo G,

Laplaze L (2020) An extended root phenotype: The rhizosphere,

its formation and impacts on plant fitness. Plant J 103: 951–964

Carrion VJ, Perez-Jaramillo J, Cordovez V, Tracanna V, de

Hollander M, Ruiz-Buck D, Mendes LW, van Ijcken WFJ,

Gomez-Exposito R, Elsayed SS, et al. (2019) Pathogen-induced

activation of disease-suppressive functions in the endophytic

root microbiome. Science 366: 606–612

Chen KJ, Zheng YQ, Kong CH, Zhang SZ, Li J, Liu XG (2010)

2,4-Dihydroxy-7-methoxy-1,4-benzoxazin-3-one (DIMBOA)

and 6-methoxy-benzoxazolin-2-one (MBOA) levels in the wheat

rhizosphere and their effect on the soil microbial community

structure. J Agric Food Chem 58: 12710–12716

Chialva M, Lanfranco L, Bonfante P (2022) The plant microbiota:

Composition, functions, and engineering. Curr Opin Biotechnol

73: 135–142

Ferreyra MLF, Rius SP, Casati P (2012) Flavonoids: Biosynthesis,

biological functions, and biotechnological applications. Front

Plant Sci 3: 00222

Fujimatsu T, Endo K, Yazaki K, Sugiyama A (2020) Secretion

dynamics of soyasaponins in soybean roots and effects to modify

the bacterial composition. Plant Direct 4: 259

Geddes BA, Paramasivan P, Joffrin A, Thompson AL, Christensen

K, Jorrin B, Brett P, Conway SJ, Oldroyd GED, Poole PS (2019)

Engineering transkingdom signalling in plants to control gene

expression in rhizosphere bacteria. Nat Commun 10: 3430

Ghimire S, Cady NM, Lehman P, Peterson SR, Shahi SK, Rashid

F, Giri S, Mangalam AK (2022) Dietary isoflavones alter gut

microbiota and lipopolysaccharide biosynthesis to reduce

inflammation. Gut Microbes 14: 2127446

Grün S, Frey M, Gierl A (2005) Evolution of the indole alkaloid

biosynthesis in the genus Hordeum: Distribution of gramine and

DIBOA and isolation of the benzoxazinoid biosynthesis genes

from Hordeum lechleri. Phytochemistry 66: 1264–1272

Guo ZY, Kong CH, Wang JG, Wang YF (2011) Rhizosphere

isoflavones (daidzein and genistein) levels and their relation to

the microbial community structure of mono-cropped soybean

soil in field and controlled conditions. Soil Biol Biochem 43:

2257–2264

Halkier BA, Gershenzon J (2006) Biology and biochemistry of

glucosinolates. Annu Rev Plant Biol 57: 303–333

Hanschen FS, Yim B, Winkelmann T, Smalla K, Schreiner M

(2015) Degradation of biofumigant isothiocyanates and

allyl glucosinolate in soil and their effects on the microbial

community composition. PLoS One 10: e0132931

Hassan S, Mathesius U (2012) The role of flavonoids in rootrhizosphere signalling: Opportunities and challenges for

Copyright © 2023 Japanese Society for Plant Biotechnology

131

132 Plant specialized metabolites modulate soil microbiota

improving plant-microbe interactions. J Exp Bot 63: 3429–3444

Hartmann A, Rothballer M, Schmid M (2008) Lorenz Hiltner, a

pioneer in rhizosphere microbial ecology and soil bacteriology

research. Plant Soil 312: 7–14

Hassani MA, Duran P, Hacquard S (2018) Microbial interactions

within the plant holobiont. Microbiome 6: 17

Hu D, Gao H, Yao X-s (2020) Biosynthesis of triterpenoid natural

products. In: Liu H-W, Begley TP (eds) Comprehensive Natural

Products III. Elsevier, Oxford, pp 577–612

Hu L, Robert CAM, Cadot S, Zhang X, Ye M, Li B, Manzo D,

Chervet N, Steinger T, van der Heijden MGA, et al. (2018) Root

exudate metabolites drive plant-soil feedbacks on growth and

defense by shaping the rhizosphere microbiota. Nat Commun 9:

2738

Hu P, Hollister EB, Somenahally AC, Hons FM, Gentry TJ (2015)

Soil bacterial and fungal communities respond differently to

various isothiocyanates added for biofumigation. Front Microbiol

5: 00729

Huang L, Zheng T, Hui H, Xie G (2022) Soybean isoflavones

modulate gut microbiota to benefit the health weight and

metabolism. Front Cell Infect Microbiol 12: 1004765

Jacoby RP, Koprivova A, Kopriva S (2021) Pinpointing secondary

metabolites that shape the composition and function of the plant

microbiome. J Exp Bot 72: 57–69

Jiang F, Chen L, Belimov AA, Shaposhnikov AI, Gong F, Meng X,

Hartung W, Jeschke DW, Davies WJ, Dodd IC (2012) Multiple

impacts of the plant growth-promoting rhizobacterium

Variovorax paradoxus 5C-2 on nutrient and ABA relations of

Pisum sativum. J Exp Bot 63: 6421–6430

Karpouzas DG, Vryzas Z, Martin-Laurent F (2022) Pesticide soil

microbial toxicity: Setting the scene for a new pesticide risk

assessment for soil microorganisms (IUPAC Technical Report).

Pure Appl Chem 94: 1161–1194

Ke J, Wang B, Yoshikuni Y (2021) Microbiome engineering:

Synthetic biology of plant-associated microbiomes in sustainable

agriculture. Trends Biotechnol 39: 244–261

Kuzyakov Y, Razavi BS (2019) Rhizosphere size and shape:

Temporal dynamics and spatial stationarity. Soil Biol Biochem

135: 343–360

Kwak MJ, Kong HG, Choi K, Kwon SK, Song JY, Lee J, Lee PA,

Choi SY, Seo M, Lee HJ, et al. (2018) Rhizoshere microbiome

structure alters to enable wilt resistance in tomato. Nat Biotechnol

36: 1100–1109

Li W, Song Y, Cao YN, Zhang LL, Zhao G, Wu DT, Zou L (2022)

Total saponins from quinoa bran alleviate high-fat diet-induced

obesity and systemic inflammation via regulation of gut

microbiota in rats. Food Sci Nutr 10: 3876–3889

Li Y, Dai S, Wang B, Jiang Y, Ma Y, Pan L, Wu K, Huang X, Zhang

J, Cai Z, et al. (2020) Autotoxic ginsenoside disrupts soil fungal

microbiomes by dtimulating potentially pathogenic microbes.

Appl Environ Microbiol 86: e00130–20

Liu Y, Ma B, Chen W, Schlaeppi K, Erb M, Stirling E, Hu L, Wang

E, Zhang Y, Zhao K, et al. (2021) Rhizobium symbiotic capacity

shapes root-associated microbiomes in soybean. Front Microbiol

12: 709012

Losi A, Gärtner W (2021) A light life together: Photosensing in the

plant microbiota. Photochem Photobiol Sci 20: 451–473

Maver M, Escudero-Martinez C, Abbott J, Morris J, Hedley PE,

Mimmo T, Bulgarelli D (2021) Applications of the indolealkaloid gramine modulate the assembly of individual members

of the barley rhizosphere microbiota. PeerJ 9: e12498

Maver M, Miras-Moreno B, Lucini L, Trevisan M, Pii Y, Cesco

Copyright © 2023 Japanese Society for Plant Biotechnology

S, Mimmo T (2020) New insights in the allelopathic traits of

different barley genotypes: Middle Eastern and Tibetan wildrelative accessions vs. cultivated modern barley. PLoS One 15:

e0231976

Mondy S, Lenglet A, Beury-Cirou A, Libanga C, Ratet P, Faure D,

Dessaux Y (2014) An increasing opine carbon bias in artificial

exudation systems and genetically modified plant rhizospheres

leads to an increasing reshaping of bacterial populations. Mol

Ecol 23: 4846–4861

Nakayasu M, Ohno K, Takamatsu K, Aoki Y, Yamazaki S, Takase

H, Shoji T, Yazaki K, Sugiyama A (2021a) Tomato roots

secrete tomatine to modulate the bacterial assemblage of the

rhizosphere. Plant Physiol 186: 270–284

Nakayasu M, Shioya N, Shikata M, Thagun C, Abdelkareem A,

Okabe Y, Ariizumi T, Arimura G-i, Mizutani M, Ezura H, et al.

(2018) JRE4 is a master transcriptional regulator of defenserelated steroidal glycoalkaloids in tomato. Plant J 94: 975–990

Nakayasu M, Takamatsu K, Yazaki K, Sugiyama A (2022) Plant

specialized metabolites in the rhizosphere of tomatoes: Secretion

and effects on microorganisms. Biosci Biotechnol Biochem 87:

13–20

Nakayasu M, Yamazaki S, Aoki Y, Yazaki K, Sugiyama A (2021b)

Triterpenoid and steroidal saponins differentially influence soil

bacterial genera. Plants 10: 2189

Ntalli N, Caboni P (2017) A review of isothiocyanates

biofumigation activity on plant parasitic nematodes. Phytochem

Rev 16: 827–834

Okutani F, Hamamoto S, Aoki Y, Nakayasu M, Nihei N, Nishimura

T, Yazaki K, Sugiyama A (2020) Rhizosphere modelling reveals

spatiotemporal distribution of daidzein shaping soybean

rhizosphere bacterial community. Plant Cell Environ 43:

1036–1046

Omirou M, Rousidou C, Bekris F, Papadopoulou KK,

Menkissoglou-Spiroudi U, Ehaliotis C, Karpouzas DG (2011)

The impact of biofumigation and chemical fumigation methods

on the structure and function of the soil microbial community.

Microb Ecol 61: 201–213

Pang Z, Chen J, Wang T, Gao C, Li Z, Guo L, Xu J, Cheng Y (2021)

Linking plant secondary metabolites and plant microbiomes: A

review. Front Plant Sci 12: 621276

Pascale A, Proietti S, Pantelides IS, Stringlis IA (2020) Modulation

of the root microbiome by plant molecules: The basis for targeted

disease suppression and plant growth promotion. Front Plant Sci

10: 01741

Pérez-Jaramillo JE, Mendes R, Raaijmakers JM (2016) Impact of

plant domestication on rhizosphere microbiome assembly and

functions. Plant Mol Biol 90: 635–644

Pietta PG (2000) Flavonoids as antioxidants. J Nat Prod 63:

1035–1042

Quispe-Huamanquispe DG, Gheysen G, Kreuze JF (2017)

Horizontal gene transfer contributes to plant evolution: The case

of Agrobacterium T-DNAs. Front Plant Sci 8: 02015

Rilling JI, Acuña JJ, Nannipieri P, Cassan F, Maruyama F, Jorquera

MA (2019) Current opinion and perspectives on the methods for

tracking and monitoring plant growth-promoting bacteria. Soil

Biol Biochem 130: 205–219

Rosenberg E, Zilber-Rosenberg I (2016) Microbes drive evolution

of animals and plants: The hologenome concept. MBio 7:

e01395–15

Rumberger A, Marschner P (2003) 2-Phenylethylisothiocyanate

concentration and microbial community composition in the

rhizosphere of canola. Soil Biol Biochem 35: 445–452

Schütz V, Frindte K, Cui J, Zhang P, Hacquard S, Schulze-Lefert

P, Knief C, Schulz M, Dörmann P (2021) Differential impact

of plant secondary metabolites on the soil microbiota. Front

Microbiol 12: 666010

Shimasaki T, Masuda S, Garrido-Oter R, Kawasaki T, Aoki Y,

Shibata A, Suda W, Shirasu K, Yazaki K, Nakano RT, et al.

(2021) Tobacco root endophytic arthrobacter harbors genomic

features enabling the catabolism of host-specific plant specialized

metabolites. MBio 12: e0084621

Siebers M, Rohr T, Ventura M, Schütz V, Thies S, Kovacic F,

Jaeger KE, Berg M, Dörmann P, Schulz M (2018) Disruption of

microbial community composition and identification of plant

growth promoting microorganisms after exposure of soil to

rapeseed-derived glucosinolates. PLoS One 13: e0200160

Sugiyama A (2021) Flavonoids and saponins in plant rhizospheres:

Roles, dynamics, and the potential for agriculture. Biosci

Biotechnol Biochem 85: 1919–1931

Sugiyama A, Yamazaki Y, Hamamoto S, Takase H, Yazaki K (2017)

Synthesis and secretion of isoflavones by field-grown soybean.

Plant Cell Physiol 58: 1594–1600

Sugiyama A, Yamazaki Y, Yamashita K, Takahashi S, Nakayama

T, Yazaki K (2016) Developmental and nutritional regulation

of isoflavone secretion from soybean roots. Biosci Biotechnol

Biochem 80: 89–94

Sun Q, Yoda K, Suzuki H (2004) Internal axial light conduction in

the stems and roots of herbaceous plants. J Exp Bot 56: 191–203

Sun S-L, Yang W-L, Fang W-W, Zhao Y-X, Guo L, Dai Y-J (2018)

The plant growth-promoting rhizobacterium Variovorax

boronicumulans CGMCC 4969 regulates the level of indole-3acetic acid synthesized from indole-3-acetonitrile. Appl Environ

Microbiol 84: e00298–18

Suzuki K, Yamashita I, Tanaka N (2002) Tobacco plants were

transformed by Agrobacterium rhizogenes infection during their

evolution. Plant J 32: 775–787

Szoboszlay M, White-Monsant A, Moe LA (2016) The effect of root

exudate 7,4′-dihydroxyflavone and naringenin on soil bacterial

community structure. PLoS One 11: 0146555

Toyofuku M, Okutani F, Nakayasu M, Hamamoto S, Takase H,

Yazaki K, Sugiyama A (2021) Enhancement of developmentally

regulated daidzein secretion from soybean roots in field

conditions as compared with hydroponic culture. Biosci

Biotechnol Biochem 85: 1165–1169

Upadhyay SK, Srivastava AK, Rajput VD, Chauhan PK, Bhojiya

A. Sugiyama AA, Jain D, Chaubey G, Dwivedi P, Sharma B, Minkina T (2022)

Root exudates: Mechanistic insight of plant growth promoting

rhizobacteria for sustainable crop production. Front Microbiol

13: 916488

Vincken JP, Heng L, de Groot A, Gruppen H (2007) Saponins,

classification and occurrence in the plant kingdom.

Phytochemistry 68: 275–297

Wang HW, Tang MJ, Su CL, Zhang W, Xu RS, Guan YX, Dai CC

(2018) The alleopathic compound luteolin from peanut litter

affects peanut nodule formation and the rhizosphere microbial

community. Agron J 110: 2587–2595

Wang P, Chai YN, Roston R, Dayan FE, Schachtman DP (2021)

The sorghum bicolor root exudate sorgoleone shapes cacterial

communities and delays network formation. mSystems 6:

e00749–20

Weston LA, Mathesius U (2013) Flavonoids: Their structure,

biosynthesis and role in the rhizosphere, including allelopathy. J

Chem Ecol 39: 283–297

Xu Y, Wang N, Tan HY, Li S, Zhang C, Zhang Z, Feng Y (2020)

Panax notoginseng saponins modulate the gut microbiota to

promote thermogenesis and beige adipocyte reconstruction

via leptin-mediated AMPKα/STAT3 signaling in diet-induced

obesity. Theranostics 10: 11302–11323

Xu Y, Yang M, Yin R, Wang L, Luo L, Zi B, Liu H, Huang H, Liu Y,

He X, et al. (2021) Autotoxin Rg(1) induces degradation of root

cell walls and aggravates root rot by modifying the rhizospheric

microbiome. Microbiol Spectr 9: e0167921

Yu P, He X, Baer M, Beirinckx S, Tian T, Moya YAT, Zhang X,

Deichmann M, Frey FP, Bresgen V, et al. (2021) Plant flavones

enrich rhizosphere Oxalobacteraceae to improve maize

performance under nitrogen deprivation. Nat Plants 7: 481–499

Zhang X, Dippold MA, Kuzyakov Y, Razavi BS (2019) Spatial

pattern of enzyme activities depends on root exudate

composition. Soil Biol Biochem 133: 83–93

Zhang YX, Ruyter-Spira C, Bouwmeester HJ (2015) Engineering

the plant rhizosphere. Curr Opin Biotechnol 32: 136–142

Zhong Y, Xun W, Wang X, Tian S, Zhang Y, Li D, Zhou Y, Qin Y,

Zhang B, Zhao G, et al. (2022) Root-secreted bitter triterpene

modulates the rhizosphere microbiota to improve plant fitness.

Nat Plants 8: 887–896

Zhou S, Richter A, Jander G (2018) Beyond defense: Multiple

functions of benzoxazinoids in maize metabolism. Plant Cell

Physiol 59: 1528–1537

Copyright © 2023 Japanese Society for Plant Biotechnology

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