Affholder M, Flöhr A, Kirchmann H . 2019. Can Cd content in crops be controlled by Se fertilization? A meta-analysis and outline of Cd sequestration mechanisms. Plant and Soil 440:369-380.
Amtmann A, Troufflard S, Armengaud P. 2008. The effect of potassium nutrition on pest and disease resistance in plants. Physiologia Plantarum 133:682-691.
Arao T, Ishikawa S, Murakami M, Abe K, Maejima Y, Makino T. 2010. Heavy metal contamination of agricultural soil and countermeasures in Japan. Paddy and Water Environment 8:247-257.
Arnon DI, Stout PR. 1939. The essentiality of certain elements in minute quantity for plants with special reference to copper. Plant Physiology 14:371-375.
Atwell S, Huang YS, Vilhjálmsson BJ, Willems G, Horton M, Li Y, Meng D, Platt A, Tarone AM, Hu TT, et al. 2010. Genome-wide association study of 107 phenotypes in Arabidopsis thaliana inbred lines. Nature 465:627-631.
Balonov MI, Bruk GY, Golikov VY, Barkovsky AN, Kravtsova EM, Kravtosova OS, Mubasarov AA, Shutov VN, Travnikova IG, Howard BJ, et al. 2007. Assessment of current exposure of the population living in the techa river basin from radioactive releases of the Mayak facility. Health Physics 92:134-147.
Baxter I. 2009. Ionomics: studying the social network of mineral nutrients. Current Opinion in Plant Biology 12:381-386.
Baxter I, Brazelton JN, Yu D, Huang YS, Lahner B, Yakubova E, Li Y, Bergelson J, Borevitz JO, Nordborg M, et al. 2010. A Coastal Cline in Sodium Accumulation in Arabidopsis thaliana Is Driven by Natural Variation of the Sodium Transporter AtHKT1;1. Plos Genetics 6:e1001193.
Baxter I, Dilkes BP. 2012. Elemental profiles reflect plant adaptations to the environment. Science 336:1661-1663.
Baxter I, Hosmani PS, Rus A, Lahner B, Borevitz JO, Muthukumar B, Mickelbart MV, Schreiber L, Franke RB, Salt DE. 2009. Root Suberin Forms an Extracellular Barrier That Affects Water Relations and Mineral Nutrition in Arabidopsis. Plos Genetics 5:e1000492.
Baxter IR, Vitek O, Lahner B, Muthukumar B, Borghi M, Morrissey J, Guerinot ML, Salt DE. 2008. The leaf ionome as a multivariable system to detect a plant's physiological status. Proceedings of the National Academy of Sciences 105:12081- 12086.
Baxter IR, Ziegler G, Lahner B, Mickelbart MV, Foley R, Danku J, Armstrong P, Salt DE, Hoekenga OA. 2014. Single-Kernel Ionomic Profiles Are Highly Heritable Indicators of Genetic and Environmental Influences on Elemental Accumulation in Maize Grain (Zea mays). Plos One 9:e87628.
Becker M, Asch F. 2005. Iron toxicity in rice—conditions and management concepts. Journal of Plant Nutrition and Soil Science 168:558-573.
Busoms S, Teres J, Huang X, Bomblies K, Danku J, Douglas A, Weigel D, Poschenrieder C, Salt DE. 2015. Salinity Is an Agent of Divergent Selection Driving Local Adaptation of Arabidopsis to Coastal Habitats. Plant Physiology 168:915-929.
Cakmak I, Marschner H. 1988. Increase in Membrane Permeability and Exudation in Roots of Zinc Deficient Plants. Journal of Plant Physiology 132:356-361.
Campbell MT, Du Q, Liu K, Sharma S, Zhang C, Walia H. 2020. Characterization of the transcriptional divergence between the subspecies of cultivated rice (Oryza sativa). Bmc Genomics 21:394.
Cao Y, Sun D, Ai H, Mei H, Liu X, Sun S, Xu G, Liu Y, Chen Y, Ma LQ. 2017. Knocking out OsPT4 gene decreases arsenate uptake by rice plants and inorganic arsenic accumulation in rice grains. Environmental Science & Technology 51:12131-12138.
Chao D, Chen Y, Chen J, Shi S, Chen Z, Wang C, Danku JM, Zhao F, Salt DE. 2014. Genome-wide Association Mapping Identifies a New Arsenate Reductase Enzyme Critical for Limiting Arsenic Accumulation in Plants. Plos Biology 12:e1002009.
Chao D, Silva A, Baxter I, Huang YS, Nordborg M, Danku J, Lahner B, Yakubova E, Salt DE. 2012. Genome-Wide Association Studies Identify Heavy Metal ATPase3 as the Primary Determinant of Natural Variation in Leaf Cadmium in Arabidopsis thaliana. Plos Genetics 8:e1002923.
Chen H, Tang Z, Wang P, Zhao F. 2018. Geographical variations of cadmium and arsenic concentrations and arsenic speciation in Chinese rice. Environmental Pollution 238:482-490.
Chen H, Yang Y, Ye Y, Tao L, Fu X, Liu B, Wu Y. 2019. Differences in cadmium accumulation between indica and japonica rice cultivars in the reproductive stage. Ecotoxicology and Environmental Safety 186:109795.
Chen W, Gao Y, Xie W, Gong L, Lu K, Wang W, Li Y, Liu X, Zhang H, Dong H, et al. 2014. Genome-wide association analyses provide genetic and biochemical insights into natural variation in rice metabolism. Nature Genetics 46:714-721.
Chen Z, Watanabe T, Shinano T, Okazaki K, Osaki M. 2009. Rapid characterization of plant mutants with an altered ion-profile: a case study using Lotus japonicus. New Phytologist 181:795-801.
Chu Q, Watanabe T, Sha Z, Osaki M, Shinano T. 2015. Interactions between Cs, Sr, and other nutrients and trace element accumulation in Amaranthus shoot in response to variety effect. Journal of Agricultural and Food Chemistry 63:2355-2363.
Civáň P, Craig H, Cox CJ, Brown TA. 2015. Three geographically separate domestications of Asian rice. Nature Plants 1:15164.
Clemens S. 2014. Zn and Fe biofortification: The right chemical environment for human bioavailability. Plant Science 225:52-57.
Cobb JN, Chen C, Shi Y, Maron LG, Liu D, Rutzke M, Greenberg A, Craft E, Shaff J, Paul E, et al. 2021. Genetic architecture of root and shoot ionomes in rice (Oryza sativa L.). Theoretical and Applied Genetics 134:2613-2637.
Curie C, Cassin G, Couch D, Divol F, Higuchi K, Le Jean M, Misson J, Schikora A, Czernic P, Mari S. 2009. Metal movement within the plant: contribution of nicotianamine and yellow stripe 1-like transporters. Annals of Botany 103:1-11.
Ding G, Lei GJ, Yamaji N, Yokosho K, Mitani-Ueno N, Huang S, Ma JF. 2020. Vascular Cambium-Localized AtSPDT Mediates Xylem-to-Phloem Transfer of Phosphorus for Its Preferential Distribution in <em>Arabidopsis</em>. Molecular Plant 13:99-111.
Du F, Liu P, Wang K, Yang Z, Wang L. 2020. Ionomic responses of rice plants to the stresses of different arsenic species in hydroponics. Chemosphere 243:125398.
Eide DJ, Clark S, Nair TM, Gehl M, Gribskov M, Guerinot ML, Harper JF. 2005. Characterization of the yeast ionome: a genome-wide analysis of nutrient mineral and trace element homeostasis in Saccharomyces cerevisiae. Genome Biology 6:R77.
El Azhari A, Rhoujjati A, El Hachimi ML, Ambrosi J. 2017. Pollution and ecological risk assessment of heavy metals in the soil-plant system and the sediment-water column around a former Pb/Zn-mining area in NE Morocco. Ecotoxicology and Environmental Safety 144:464-474.
El MA, Jiang Y, Guignardi ZS, Esmat A, Pilon M, Pilon-Smits E, Schiavon M. 2018. Influence of sulfate supply on selenium uptake dynamics and expression of sulfate/selenate transporters in selenium hyperaccumulator and nonhyperaccumulator Brassicaceae. New Phytologist 217:194-205.
Enstone DE, Peterson CA, Ma F. 2002. Root Endodermis and Exodermis: Structure, Function, and Responses to the Environment. Journal of Plant Growth Regulation 21:335-351.
Feng X, Han L, Chao D, Liu Y, Zhang Y, Wang R, Guo J, Feng R, Xu Y, Ding Y, et al. 2017. Ionomic and transcriptomic analysis provides new insight into the distribution and transport of cadmium and arsenic in rice. Journal of Hazardous Materials 331:246-256.
Forsberg SKG, Andreatta ME, Huang X, Danku J, Salt DE, Carlborg Ö. 2015. The Multi-allelic Genetic Architecture of a Variance-Heterogeneity Locus for Molybdenum Concentration in Leaves Acts as a Source of Unexplained Additive Genetic Variance. Plos Genetics 11:e1005648.
Ghimiray M, Vernooy R. 2017. The importance and challenges of crop germplasm interdependence: the case of Bhutan. Food Security 9:301-310.
Gogarten SM, Sofer T, Chen H, Yu C, Brody JA, Thornton TA, Rice KM, Conomos MP. 2019. Genetic association testing using the GENESIS R/Bioconductor package. Bioinformatics 35:5346-5348.
Gu J, Zhou H, Tang H, Yang W, Zeng M, Liu Z, Peng P, Liao B. 2019. Cadmium and arsenic accumulation during the rice growth period under in situ remediation. Ecotoxicology and Environmental Safety 171:451-459.
Gu R, Chen F, Liu B, Wang X, Liu J, Li P, Pan Q, Pace J, Soomro A, Lübberstedt T, et al. 2015. Comprehensive phenotypic analysis and quantitative trait locus identification for grain mineral concentration, content, and yield in maize (Zea mays L.). Theoretical and Applied Genetics 128:1777-1789.
Hosmani PS, Kamiya T, Danku J, Naseer S, Geldner N, Guerinot ML, Salt DE. 2013. Dirigent domain-containing protein is part of the machinery required for formation of the lignin-based Casparian strip in the root. Proceedings of the National Academy of Sciences 110:14498.
Huang X, Han B. 2014. Natural Variations and Genome-Wide Association Studies in Crop Plants. Annual Review of Plant Biology 65:531-551.
Huang X, Salt DE. 2016. Plant Ionomics: From Elemental Profiling to Environmental Adaptation. Molecular Plant 9:787-797.
Huang X, Wei X, Sang T, Zhao Q, Feng Q, Zhao Y, Li C, Zhu C, Lu T, Zhang Z, et al. 2010. Genome-wide association studies of 14 agronomic traits in rice landraces. Nature Genetics 42:961-967.
Huang X, Zhao Y, Wei X, Li C, Wang A, Zhao Q, Li W, Guo Y, Deng L, Zhu C, et al. 2012. Genome-wide association study of flowering time and grain yield traits in a worldwide collection of rice germplasm. Nature Genetics 44:32-39.
Ishikawa J, Fujimura S, Kondo M, Murai-Hatano M, Goto A, Shinano T. 2018. Dynamic changes in the Cs distribution throughout rice plants during the ripening period, and effects of the soil-K level. Plant and Soil 429:503-518.
Jeschke WD, Hartung W. 2000. Root-shoot interactions in mineral nutrition. Plant and Soil:57-69.
Jiang Y, Song M, Zhang S, Cai Z, Lei Y. 2018. Unravelling community assemblages through multi-element stoichiometry in plant leaves and roots across primary successional stages in a glacier retreat area. Plant and Soil 428:291-305.
Kabir AH, Begum MC, Haque A, Amin R, Swaraz AM, Haider SA, Paul NK, Hossain MM. 2016. Genetic variation in Fe toxicity tolerance is associated with the regulation of translocation and chelation of iron along with antioxidant defence in shoots of rice. Functional Plant Biology 43:1070.
Kamiya T, Borghi M, Wang P, Danku JMC, Kalmbach L, Hosmani PS, Naseer S, Fujiwara T, Geldner N, Salt DE. 2015. The MYB36 transcription factor orchestrates Casparian strip formation. Proceedings of the National Academy of Sciences 112:10533.
Khush GS. 2005. What it will take to feed 5.0 billion rice consumers in 2030. Plant Molecular Biology 59:1-6.
Kirkby E. 2012. Chapter 1 - Introduction, Definition and Classification of Nutrients. In Marschner's Mineral Nutrition of Higher Plants (Third Edition), P. Marschner, ed., pp. 3-5. San Diego: Academic Press.
Kochian LV, Piñeros MA, Liu J, Magalhaes JV . 2015. Plant Adaptation to Acid Soils: The Molecular Basis for Crop Aluminum Resistance. Annual Review of Plant Biology 66:571-598.
Kolbert Z, Molnár Á, Feigl G, Van Hoewyk D . 2019. Plant selenium toxicity: Proteome in the crosshairs. Journal of Plant Physiology 232:291-300.
Koprivova A, Giovannetti M, Baraniecka P, Lee B, Grondin C, Loudet O, Kopriva S. 2013. Natural Variation in the ATPS1 Isoform of ATP Sulfurylase Contributes to the Control of Sulfate Levels in Arabidopsis . Plant Physiology 163:1133-1141.
Kubo K, Kobayashi H, Nitta M, Takenaka S, Nasuda S, Fujimura S, Takagi K, Nagata O, Ota T, Shinano T. 2020. Variations in radioactive cesium accumulation in wheat germplasm from fields affected by the 2011 Fukushima nuclear power plant accident. Scientific Reports 10:3744.
Kumar S, Asif MH, Chakrabarty D, Tripathi RD, Trivedi PK. 2011. Differential expression and alternative splicing of rice sulphate transporter family members regulate sulphur status during plant growth, development and stress conditions. Functional & Integrative Genomics 11:259-273.
Lahner B, Gong J, Mahmoudian M, Smith EL, Abid KB, Rogers EE, Guerinot ML, Harper JF, Ward JM, McIntyre L, et al. 2003. Genomic scale profiling of nutrient and trace elements in Arabidopsis thaliana. Nature Biotechnology 21:1215- 1221.
Lambers H, Finnegan PM, Jost R, Plaxton WC, Shane MW, Stitt M. 2015. Phosphorus nutrition in Proteaceae and beyond. Nature Plants 1:15109.
Li Z, Ma Z, van der Kuijp TJ, Yuan Z, Huang L. 2014. A review of soil heavy metal pollution from mines in China: Pollution and health risk assessment. Science of the Total Environment 468-469:843-853.
Lipka AE, Tian F, Wang Q, Peiffer J, Li M, Bradbury PJ, Gore MA, Buckler ES, Zhang Z. 2012. GAPIT: genome association and prediction integrated tool. Bioinformatics 28:2397-2399.
López -Pérez L, Martínez -Ballesta MDC, Maurel C, Carvajal M. 2009. Changes in plasma membrane lipids, aquaporins and proton pump of broccoli roots, as an adaptation mechanism to salinity. Phytochemistry 70:492-500.
Loudet O, Saliba-Colombani V, Camilleri C, Calenge F, Gaudon V, Koprivova A, North KA, Kopriva S, Daniel-Vedele F. 2007. Natural variation for sulfate content in Arabidopsis thaliana is highly controlled by APR2. Nature Genetics 39:896-900.
Maejima E, Watanabe T, Osaki M, Wagatsuma T. 2014. Phosphorus deficiency enhances aluminum tolerance of rice (Oryza sativa) by changing the physicochemical characteristics of root plasma membranes and cell walls. Journal of Plant Physiology 171:9-15.
Malinouski M, Hasan NM, Zhang Y, Seravalli J, Lin J, Avanesov A, Lutsenko S, Gladyshev VN. 2014. Genome-wide RNAi ionomics screen reveals new genes and regulation of human trace element metabolism. Nature Communications 5:3301.
Maruyama-Nakashita A, Nakamura Y, Watanabe-Takahashi A, Yamaya T, Takahashi H. 2004. Induction of SULTR1;1 Sulfate Transporter in Arabidopsis Roots Involves Protein Phosphorylation/Dephosphorylation Circuit for Transcriptional Regulation. Plant and Cell Physiology 45:340-345.
Maruyama-Nakashita A, Watanabe-Takahashi A, Inoue E, Yamaya T, Saito K, Takahashi H. 2015. Sulfur-Responsive Elements in the 3 ′ -Nontranscribed Intergenic Region Are Essential for the Induction of SULFATE TRANSPORTER 2;1 Gene Expression in Arabidopsis Roots under Sulfur Deficiency. The Plant Cell 27:1279-1296.
Matsuda F, Nakabayashi R, Yang Z, Okazaki Y, Yonemaru J, Ebana K, Yano M, Saito K. 2015. Metabolome-genome-wide association study dissects genetic architecture for generating natural variation in rice secondary metabolism. The Plant Journal 81:13-23.
Mitani-Ueno N, Yamaji N, Ma JF. 2018. Transport System of Mineral Elements in Rice. In Rice Genomics, Genetics and Breeding, T. SasakiM. Ashikari, eds., pp. 223-240. Singapore: Springer Singapore.
Muthayya S, Sugimoto JD, Montgomery S, Maberly GF. 2014. An overview of global rice production, supply, trade, and consumption. Annals of the New York Academy of Sciences 1324:7-14.
Nawaz Z, Kakar KU, Li X, Li S, Zhang B, Shou H, Shu Q. 2015. Genome-wide Association Mapping of Quantitative Trait Loci (QTLs) for Contents of Eight Elements in Brown Rice (Oryza sativa L.). Journal of Agricultural and Food Chemistry 63:8008-8016.
Neugebauer K, El-Serehy HA, George TS, McNicol JW, Moraes MF, Sorreano MCM, White PJ. 2020. The influence of phylogeny and ecology on root, shoot and plant ionomes of 14 native Brazilian species. Physiologia Plantarum 168:790-802.
Nkrumah PN, Echevarria G, Erskine PD, Chaney RL, Sumail S, van der Ent A. 2021. Variation in the ionome of tropical ‘ metal crops’ in response to soil potassium availability. Plant and Soil 465:185-195.
Norton GJ, Deacon CM, Xiong L, Huang S, Meharg AA, Price AH. 2010. Genetic mapping of the rice ionome in leaves and grain: identification of QTLs for 17 elements including arsenic, cadmium, iron and selenium. Plant and Soil 329:139- 153.
Norton GJ, Douglas A, Lahner B, Yakubova E, Guerinot ML, Pinson SR, Tarpley L, Eizenga GC, McGrath SP, Zhao FJ, et al. 2014. Genome wide association mapping of grain arsenic, copper, molybdenum and zinc in rice (Oryza sativa L.) grown at four international field sites. Plos One 9:e89685.
Outten CE, O'Halloran ATV. 2001. Femtomolar Sensitivity of Metalloregulatory Proteins Controlling Zinc Homeostasis. Science 292:2488-2492.
Ozaki T, Ambe S, Abe T, Francis AJ. 2005. Competitive inhibition and selectivity enhancement by Ca in the uptake of inorganic elements (Be, Na, Mg, K, Ca, Sc, Mn, Co, Zn, Se, Rb, Sr, Y, Zr, Ce, Pm, Gd, Hf) by carrot (Daucus carota cv. U.S. harumakigosun). Biological Trace Element Research 103:69-82.
Palmgren MG, Clemens S, Williams LE, Krämer U, Borg S, Schjørring JK, Sanders D. 2008. Zinc biofortification of cereals: problems and solutions. Trends in Plant Science 13:464-473.
Pillon Y, Petit D, Gady C, Soubrand M, Joussein E, Saladin G. 2019. Ionomics suggests niche differences between sympatric heathers (Ericaceae). Plant and Soil 434:481-489.
Pinson SRM, Tarpley L, Yan W, Yeater K, Lahner B, Yakubova E, Huang X, Zhang M, Guerinot ML, Salt DE. 2015. Worldwide Genetic Diversity for Mineral Element Concentrations in Rice Grain. Crop Science 55:294-311.
Pinto E, Ferreira IMPL. 2015. Cation transporters/channels in plants: Tools for nutrient biofortification. Journal of Plant Physiology 179:64-82.
Qiao K, Wang F, Liang S, Wang H, Hu Z, Chai T. 2019. New biofortification tool: wheat TaCNR5 enhances zinc and manganese tolerance and increases zinc and manganese accumulation in rice grains. Journal of Agricultural and Food Chemistry 67:9877-9884.
Rai H, Yokoyama S, Satoh-Nagasawa N, Furukawa J, Nomi T, Ito Y, Fujimura S, Takahashi H, Suzuki R, Yousra E, et al. 2017. Cesium uptake by rice roots largely depends upon a single gene, HAK1, which encodes a potassium transporter. Plant and Cell Physiology 58:1486-1493.
Rausch T, Wachter A. 2005. Sulfur metabolism: a versatile platform for launching defence operations. Trends in Plant Science 10:503-509.
Ren Z, Gao J, Li L, Cai X, Huang W, Chao D, Zhu M, Wang Z, Luan S, Lin H. 2005. A rice quantitative trait locus for salt tolerance encodes a sodium transporter. Nature Genetics 37:1141-1146.
Rennenberg H. 1984. The fate of excess sulfur in higher plants. Annual Review of Plant Physiology 35:121-153.
Robbins NEI, Trontin C, Duan L, Dinneny JR. 2014. Beyond the Barrier: Communication in the Root through the Endodermis. Plant Physiology 166:551-559.
Römheld V, Kir kby EA. 2010. Research on potassium in agriculture: needs and prospects. Plant and Soil 335:155-180.
Rus A, Baxter I, Muthukumar B, Gustin J, Lahner B, Yakubova E, Salt DE. 2006. Natural Variants of AtHKT1 Enhance Na+ Accumulation in Two Wild Populations of Arabidopsis. Plos Genetics 2:e210.
Salt DE, Baxter I, Lahner B. 2008. Ionomics and the study of the plant ionome. Annual Review of Plant Biology 59:709-733.
Sánchez -Rodríguez E, Del Mar Rubio -Wilhelmi M, Cervilla LM, Blasco B, Rios JJ, Leyva R, Romero L, Ruiz JM. 2010. Study of the ionome and uptake fluxes in cherry tomato plants under moderate water stress conditions. Plant and Soil 335:339-347.
Sasaki A, Yamaji N, Ma JF. 2016. Transporters involved in mineral nutrient uptake in rice. Journal of Experimental Botany 67:3645-3653.
Schaaf G, Honsbein A, Meda AR, Kirchner S, Wipf D, von Wirén N . 2006. AtIREG2 Encodes a Tonoplast Transport Protein Involved in Iron-dependent Nickel Detoxification in Arabidopsis thaliana Roots. Journal of Biological Chemistry 281:25532-25540.
Schiavon M, Pilon-Smits EAH, Wirtz M, Hell R, Malagoli M. 2008. Interactions between chromium and sulfur metabolism in Brassica juncea. Journal of Environmental Quality 37:1536-1545.
Schroeder JI, Delhaize E, Frommer WB, Guerinot ML, Harrison MJ, Herrera- Estrella L, Horie T, Kochian LV, Munns R, Nishizawa NK, et al. 2013. Using membrane transporters to improve crops for sustainable food production. Nature 497:60-66.
Shen X, Pettersson M, Rönnegård L, Carlborg Ö . 2012. Inheritance Beyond Plain Heritability: Variance-Controlling Genes in Arabidopsis thaliana. Plos Genetics 8:e1002839.
Shibagaki N, Rose A, McDermott JP, Fujiwara T, Hayashi H, Yoneyama T, Davies JP. 2002. Selenate-resistant mutants of Arabidopsis thaliana identify Sultr1;2, a sulfate transporter required for efficient transport of sulfate into roots. The Plant Journal 29:475-486.
Singh A, Septiningsih EM, Balyan HS, Singh NK, Rai V. 2017. Genetics, physiological mechanisms and breeding of flood-tolerant rice (Oryza sativa L.). Plant and Cell Physiology 58:185-197.
Spielmann J, Ahmadi H, Scheepers M, Weber M, Nitsche S, Carnol M, Bosman B, Kroymann J, Motte P, Clemens S, et al. 2020. The two copies of the zinc and cadmium ZIP6 transporter of Arabidopsis halleri have distinct effects on cadmium tolerance. Plant, Cell & Environment 43:2143-2157.
Stein JC, Yu Y, Copetti D, Zwickl DJ, Zhang L, Zhang C, Chougule K, Gao D, Iwata A, Goicoechea JL, et al. 2018. Genomes of 13 domesticated and wild rice relatives highlight genetic conservation, turnover and innovation across the genus Oryza. Nature Genetics 50:285-296.
Stein RJ, Höreth S, de Melo JRF, Syllwasschy L, Lee G, Garbin ML, Clemens S, Krämer U . 2017. Relationships between soil and leaf mineral composition are element-specific, environment-dependent and geographically structured in the emerging model Arabidopsis halleri. New Phytologist 213:1274-1286.
Sterckeman T, Cazes Y, Gonneau C, Sirguey C. 2017. Phenotyping 60 populations of the hyperaccumulator Noccaea caerulescens. In 14th International Conference on the Biogeochemistry of Trace Elements (ICOBTE 2017), ETH, Jul 2017, Zürich, Switzerland. pp. 250.
Sun L, Yu Y, Huang T, An P, Yu D, Yu Z, Li H, Sheng H, Cai L, Xue J, et al. 2012. Associations between Ionomic Profile and Metabolic Abnormalities in Human Population. Plos One 7:e38845.
Suriyagoda LDB, Dittert K, Lambers H. 2018. Mechanism of arsenic uptake, translocation and plant resistance to accumulate arsenic in rice grains. Agriculture, Ecosystems & Environment 253:23-37.
Takahashi H, Watanabe-Takahashi A, Smith FW, Blake-Kalff M, Hawkesford MJ, Saito K. 2000. The roles of three functional sulphate transporters involved in uptake and translocation of sulphate in Arabidopsis thaliana. The Plant Journal 23:171-182.
Takahashi H, Watanabe-Takahashi A, Smith FW, Blake-Kalff M, Hawkesford MJ, Saito K. 2000. The roles of three functional sulphate transporters involved in uptake and translocation of sulphate in Arabidopsis thaliana. The Plant Journal 23:171-182.
Takahashi R, Ishimaru Y, Shimo H, Ogo Y, Senoura T, Nishizawa NK, Nakanishi H. 2012. The OsHMA2 transporter is involved in root-to-shoot translocation of Zn and Cd in rice. Plant, Cell & Environment 35:1948-1957.
Tan Y, Sun L, Song Q, Mao D, Zhou J, Jiang Y, Wang J, Fan T, Zhu Q, Huang D, et al. 2020. Genetic architecture of subspecies divergence in trace mineral accumulation and elemental correlations in the rice grain. Theoretical and Applied Genetics 133:529-545.
Tanaka N, Shenton M, Kawahara Y, Kumagai M, Sakai H, Kanamori H, Yonemaru J, Fukuoka S, Sugimoto K, Ishimoto M, et al. 2020. Investigation of the genetic diversity of a rice core collection of Japanese landraces using whole- genome sequencing. Plant and Cell Physiology 61:2087-2096.
Tanaka N, Shenton M, Kawahara Y, Kumagai M, Sakai H, Kanamori H, Yonemaru J, Fukuoka S, Sugimoto K, Ishimoto M, et al. 2020. Whole-genome sequencing of the NARO world rice core collection (WRC) as the basis for diversity and association studies. Plant and Cell Physiology 61:922-932.
Tomatsu H, Takano J, Takahashi H, Watanabe-Takahashi A, Shibagaki N, Fujiwara T. 2007. An <em>Arabidopsis thaliana</em> high-affinity molybdate transporter required for efficient uptake of molybdate from soil. Proceedings of the National Academy of Sciences 104:18807.
Watanabe T, Azuma T. 2021. Ionomic variation in leaves of 819 plant species growing in the botanical garden of Hokkaido University, Japan. Journal of Plant Research.
Watanabe T, Broadley MR, Jansen S, White PJ, Takada J, Satake K, Takamatsu T, Tuah SJ, Osaki M. 2007. Evolutionary control of leaf element composition in plants. New Phytologist 174:516-523.
Watanabe T, Jansen S, Osaki M. 2005. The beneficial effect of aluminium and the role of citrate in Al accumulation in Melastoma malabathricum. New Phytologist 165:773-780.
Watanabe T, Kouho R, Katayose T, Kitajima N, Sakamote N, Yamaguchi N, Shinano T, Yurimoto H, Osaki M. 2014. Arsenic alters uptake and distribution of sulphur in Pteris vittata. Plant, Cell & Environment 37:45-53.
Watanabe T, Maejima E, Yoshimura T, Urayama M, Yamauchi A, Owadano M, Okada R, Osaki M, Kanayama Y, Shinano T. 2016. The Ionomic study of vegetable crops. Plos One 8:e160273.
Watanabe T, Urayama M, Shinano T, Okada R, Osaki M. 2015. Application of ionomics to plant and soil in fields under long-term fertilizer trials. SpringerPlus 4:781.
White PJ, Broadley MR. 2009. Biofortification of crops with seven mineral elements often lacking in human diets-iron, zinc, copper, calcium, magnesium, selenium and iodine. New Phytologist 182:49-84.
White PJ, Broadley MR, Thompson JA, McNicol JW, Crawley MJ, Poulton PR, Johnston AE. 2012. Testing the distinctness of shoot ionomes of angiosperm families using the Rothamsted Park Grass Continuous Hay Experiment. New Phytologist 196:101-109.
White PJ, Brown PH. 2010. Plant nutrition for sustainable development and global health. Annals of Botany 105:1073-1080.
Wu Q, Zhu X, Zhao X, Shen R. 2020. Potassium affects cadmium resistance in Arabidopsis through facilitating root cell wall Cd retention in a nitric oxide dependent manner. Environmental and Experimental Botany 178:104175.
Xu Q, Wang C, Li S, Li B, Li Q, Chen G, Chen W, Wang F. 2017. Cadmium adsorption, chelation and compartmentalization limit root-to-shoot translocation of cadmium in rice (Oryza sativa L.). Environmental Science and Pollution Research 24:11319-11330.
Xu Y, Zhang S, Guo H, Wang S, Xu L, Li C, Qian Q, Chen F, Geisler M, Qi Y, et al. 2014. OsABCB14 functions in auxin transport and iron homeostasis in rice (Oryza sativa L.). The Plant Journal 79:106-117.
Yan H, Xu W, Xie J, Gao Y, Wu L, Sun L, Feng L, Chen X, Zhang T, Dai C, et al. 2019. Variation of a major facilitator superfamily gene contributes to differential cadmium accumulation between rice subspecies. Nature Communications 10.
Yang M, Lu K, Zhao F, Xie W, Ramakrishna P, Wang G, Du Q, Liang L, Sun C, Zhao H, et al. 2018. Genome-wide association studies reveal the genetic basis of ionomic variation in rice. The Plant Cell 30:2720-2740.
Yano K, Yamamoto E, Aya K, Takeuchi H, Lo P, Hu L, Yamasaki M, Yoshida S, Kitano H, Hirano K, et al. 2016. Genome-wide association study using whole- genome sequencing rapidly identifies new genes influencing agronomic traits in rice. Nature Genetics 48:927-934.
Yu D, Danku JMC, Baxter I, Kim S, Vatamaniuk OK, Vitek O, Ouzzani M, Salt DE. 2012. High-resolution genome-wide scan of genes, gene-networks and cellular systems impacting the yeast ionome. Bmc Genomics 13:623.
Yu J, Pressoir G, Briggs WH, Vroh Bi I, Yamasaki M, Doebley JF, McMullen MD, Gaut BS, Nielsen DM, Holland JB, et al. 2006. A unified mixed-model method for association mapping that accounts for multiple levels of relatedness. Nature Genetics 38:203-208.
Zhang C, Hiradate S, Kusumoto Y, Morita S, Koyanagi TF, Chu Q, Watanabe T. 2021. Ionomic Responses of Local Plant Species to Natural Edaphic Mineral Variations. Frontiers in Plant Science 12:510-530.
Zhang C, Tanaka N, Dwiyanti MS, Shenton M, Maruyama H, Shinano T, Chu Q, Xie J, Watanabe T. 2022. Ionomic Profiling of Rice Genotypes and Identification of Varieties with Elemental Covariation Effects. Rice Science 29:76-88.
Zhang C, Zhao W, Gao A, Su T, Wang Y, Zhang Y, Zhou X, He X. 2018. How could agronomic biofortification of rice be an alternative strategy with higher cost- effectiveness for human iron and zinc deficiency in China? Food and Nutrition Bulletin 39:246-259.
Zhang L, Hu B, Li W, Che R, Deng K, Li H, Yu F, Ling H, Li Y, Chu C. 2014. OsPT2, a phosphate transporter, is involved in the active uptake of selenite in rice. New Phytologist 201:1183-1191.
Zhou H, Zhu W, Yang W, Gu J, Gao Z, Chen L, Du W, Zhang P, Peng P, Liao B. 2018. Cadmium uptake, accumulation, and remobilization in iron plaque and rice tissues at different growth stages. Ecotoxicology and Environmental Safety 152:91- 97.
Ziegler G, Terauchi A, Becker A, Armstrong P, Hudson K, Baxter I. 2013. Ionomic Screening of Field-Grown Soybean Identifies Mutants with Altered Seed Elemental Composition. The Plant Genome 6:e2012-e2017.
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