1.
Shichida, Y.; Matsuyama, T., Evolution of Opsins and Phototransduction. Philos. Trans.
R. Soc. B 2009, 364, 2881-2895.
2.
Koyanagi, M.; Terakita, A., Diversity of Animal Opsin-Based Pigments and Their
Optogenetic Potential. Biochim. Biophys. Acta 2014, 1837, 710-716.
3.
Tarttelin, E. E.; Bellingham, J.; Hankins, M. W.; Foster, R. G.; Lucas, R. J., Neuropsin
(Opn5): A Novel Opsin Identified in Mammalian Neural Tissue. FEBS Lett. 2003, 554, 410-416.
4.
Tomonari, S.; Migita, K.; Takagi, A.; Noji, S.; Ohuchi, H., Expression Patterns of the
Opsin 5–Related Genes in the Developing Chicken Retina. Dev. Dyn. 2008, 237, 1910-1922.
5.
Yamashita, T., Unexpected Molecular Diversity of Vertebrate Nonvisual Opsin Opn5.
Biophys. Rev. 2020, 12, 333-338.
6.
Yamashita, T.; Ohuchi, H.; Tomonari, S.; Ikeda, K.; Sakai, K.; Shichida, Y., Opn5 Is a
UV-Sensitive Bistable Pigment That Couples with Gi Subtype of G Protein. Proc. Natl. Acad.
Sci. USA 2010, 107, 22084-22089.
7.
Kojima, D.; Mori, S.; Torii, M.; Wada, A.; Morishita, R.; Fukada, Y., UV-Sensitive
Photoreceptor Protein Opn5 in Humans and Mice. PLOS ONE 2011, 6, e26388.
8.
Ohuchi, H.; Yamashita, T.; Tomonari, S.; Fujita-Yanagibayashi, S.; Sakai, K.; Noji, S.;
Shichida, Y., A Non-Mammalian Type Opsin 5 Functions Dually in the Photoreceptive and NonPhotoreceptive Organs of Birds. PLOS ONE 2012, 7, e31534.
9.
Yamashita, T.; Ono, K.; Ohuchi, H.; Yumoto, A.; Gotoh, H.; Tomonari, S.; Sakai, K.;
Fujita, H.; Imamoto, Y.; Noji, S., et al., Evolution of Mammalian Opn5 as a Specialized UVAbsorbing Pigment by a Single Amino Acid Mutation. J. Biol. Chem. 2014, 289, 3991-4000.
10.
Sato, K.; Yamashita, T.; Haruki, Y.; Ohuchi, H.; Kinoshita, M.; Shichida, Y., Two UVSensitive Photoreceptor Proteins, Opn5m and Opn5m2 in Ray-Finned Fish with Distinct
Molecular Properties and Broad Distribution in the Retina and Brain. PLOS ONE 2016, 11,
e0155339.
11.
Sato, K.; Yamashita, T.; Ohuchi, H.; Takeuchi, A.; Gotoh, H.; Ono, K.; Mizuno, M.;
Mizutani, Y.; Tomonari, S.; Sakai, K., et al., Opn5L1 Is a Retinal Receptor That Behaves as a
Reverse and Self-Regenerating Photoreceptor. Nat. Commun. 2018, 9, 1255.
12.
Mathies, R. A.; Smith, S. O.; Palings, I., Determination of Retinal Chromophore
Structure in Rhodopsins. In Biological Application of Raman Spectroscopy, Spiro, T. G., Ed.;
John Wiley and Sons: New York, 1988; Vol. II, pp 59-108.
13.
Althaus, T.; Eisfeld, W.; Lohrmann, R.; Stockburger, M., Application of Raman
Spectroscopy to Retinal Proteins. Isr. J. Chem. 1995, 35, 227-251.
14.
Hamaguchi, H.-o.; Okamoto, H.; Tasumi, M.; Mukai, Y.; Koyama, Y., Transient Raman
Spectra of the All-trans and 7-, 9-, 11- and 13-Mono-cis Isomers of Retinal and the Mechanism
of the cis-trans Isomerization in the Lowest Excited Triplet State. Chem. Phys. Lett. 1984, 107,
355-359.
15.
Mathies, R.; Freedman, T. B.; Stryer, L., Resonance Raman Studies of the Conformation
of Retinal in Rhodopsin and Isorhodopsin. J. Mol. Biol. 1977, 109, 367-372.
16.
Braiman, M.; Mathies, R., Resonance Raman Evidence for an All-Trans to 13-Cis
Isomerization in the Proton-Pumping Cycle of Bacteriorhodopsin. Biochemistry 1980, 19, 54215428.
17.
Palings, I.; Pardoen, J. A.; Van den Berg, E.; Winkel, C.; Lugtenburg, J.; Mathies, R. A.,
Assignment of Fingerprint Vibrations in the Resonance Raman Spectra of Rhodopsin,
24
Isorhodopsin, and Bathorhodopsin: Implications for Chromophore Structure and Environment.
Biochemistry 1987, 26, 2544-2556.
18.
Fodor, S. P.; Pollard, W. T.; Gebhard, R.; van den Berg, E. M.; Lugtenburg, J.; Mathies,
R. A., Bacteriorhodopsin's L550 Intermediate Contains a C14-C15 S-trans-Retinal Chromophore.
Proc. Natl. Acad. Sci. USA 1988, 85, 2156-2160.
19.
Fodor, S. P. A.; Ames, J. B.; Gebhard, R.; van den Berg, E. M. M.; Stoeckenius, W.;
Lugtenburg, J.; Mathies, R. A., Chromophore Structure in Bacteriorhodopsin's N Intermediate:
Implications for the Proton-Pumping Mechanism. Biochemistry 1988, 27, 7097-7101.
20.
Smith, S. O.; Pardoen, J. A.; Mulder, P. P. J.; Curry, B.; Lugtenburg, J.; Mathies, R.,
Chromophore Structure in Bacteriorhodopsin's O640 Photointermediate. Biochemistry 1983, 22,
6141-6148.
21.
Smith, S. O.; Pardoen, J. A.; Lugtenburg, J.; Mathies, R. A., Vibrational Analysis of the
13-cis-Retinal Chromophore in Dark-Adapted Bacteriorhodopsin. J. Phys. Chem. 1987, 91, 804819.
22.
Smith, S. O.; Braiman, M. S.; Myers, A. B.; Pardoen, J. A.; Courtin, J. M. L.; Winkel, C.;
Lugtenburg, J.; Mathies, R. A., Vibrational Analysis of the All-trans-Retinal Chromophore in
Light-Adapted Bacteriorhodopsin. J. Am. Chem. Soc. 1987, 109, 3108-3125.
23.
Palings, I.; Van den Berg, E. M. M.; Lugtenburg, J.; Mathies, R. A., Complete
Assignment of the Hydrogen out-of-Plane Wagging Vibrations of Bathorhodopsin:
Chromophore Structure and Energy Storage in the Primary Photoproduct of Vision. Biochemistry
1989, 28, 1498-1507.
24.
Lohrmann, R.; Stockburger, M., Time-Resolved Resonance Raman Studies of
Bacteriorhodopsin and Its Intermediates K590 and L550: Biological Implications. J. Raman
Spectrosc. 1992, 23, 575-583.
25.
Nishimura, N.; Mizuno, M.; Kandori, H.; Mizutani, Y., Distortion and a Strong Hydrogen
Bond in the Retinal Chromophore Enable Sodium-Ion Transport by the Sodium-Ion Pump KR2.
J. Phys. Chem. B 2019, 123, 3430-3440.
26.
Baasov, T.; Friedman, N.; Sheves, M., Factors Affecting the C=N Stretching in
Protonated Retinal Schiff Base: A Model Study for Bacteriorhodopsin and Visual Pigments.
Biochemistry 1987, 26, 3210-3217.
27.
Aton, B.; Doukas, A. G.; Callender, R. H.; Becher, B.; Ebrey, T. G., Resonance Raman
Studies of the Purple Membrane. Biochemistry 1977, 16, 2995-2999.
28.
Otomo, A.; Mizuno, M.; Singh, M.; Shihoya, W.; Inoue, K.; Nureki, O.; Béjà, O.;
Kandori, H.; Mizutani, Y., Resonance Raman Investigation of the Chromophore Structure of
Heliorhodopsins. J. Phys. Chem. Lett. 2018, 9, 6431-6436.
29.
Niwa, H.; Yamamura, K.-i.; Miyazaki, J.-i., Efficient Selection for High-Expression
Transfectants with a Novel Eukaryotic Vector. Gene 1991, 108, 193-199.
30.
Lugtenburg, J., The Synthesis of 13C-Labelled Retinals. Pure Appl. Chem. 1985, 57, 753762.
31.
Wada, A.; Fujioka, N.; Tanaka, Y.; Ito, M., A Highly Stereoselective Synthesis of 11ZRetinal Using Tricarbonyliron Complex. J. Org. Chem. 2000, 65, 2438-2443.
32.
Ojima, I.; Kogure, T., Reduction of Carbonyl Compounds Via Hydrosilylation. 4. Highly
Regioselective Reductions of , -Unsaturated Carbonyl Compounds. Organometallics 1982, 1,
1390-1399.
25
33.
Frisch, M. J.; Trucks, G. W.; Schlegel, H. B.; Scuseria, G. E.; Robb, M. A.; Cheeseman, J.
R.; Scalmani, G.; Barone, V.; Petersson, G. A.; Nakatsuji, H., et al. Gaussian 16 Rev. C.01,
Wallingford, CT, 2016.
34.
Yoshida, H.; Ehara, A.; Matsuura, H., Density Functional Vibrational Analysis Using
Wavenumber-Linear Scale Factors. Chem. Phys. Lett. 2000, 325, 477-483.
35.
Gawinowicz, M. A.; Balogh-Nair, V.; Sabol, J. S.; Nakanishi, K., A Nonbleachable
Rhodopsin Analogue Formed from 11,12-Dihydroretinal. J. Am. Chem. Soc. 1977, 99, 77207721.
36.
Fujiyabu, C.; Sato, K.; Nishio, Y.; Imamoto, Y.; Ohuchi, H.; Shichida, Y.; Yamashita, T.,
Amino Acid Residue at Position 188 Determines the UV-Sensitive Bistable Property of
Vertebrate Non-Visual Opsin Opn5. Commun. Biol. 2022, 5, 63.
37.
Sakai, K.; Shichida, Y.; Imamoto, Y.; Yamashita, T., Creation of Photocyclic Vertebrate
Rhodopsin by Single Amino Acid Substitution. eLife 2022, 11, e75979.
26
TOC graphic
27
...