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Figure Legends
Fig. 1.
Multiple sequence alignment and structural comparison of the first PDZ domain of
ZO-1 and second PDZ domain of PSD-95. (A) Structure based multiple sequence alignment of
selected PDZ domains against crystal structure of mouse ZO-1-PDZ1 (PDB: 4yyx_A). Protein
names and accession numbers are as follows: ZO-1 mouse, P39447.2; rat, A0A0G2K2P5;
human, Q07157.3; PSD-95 mouse, Q62108.1; rat, P31016.1; and human P78352.3, respectively.
The secondary structure of ZO-1(PDZ1) was shown below the sequence. The residues
corresponding to the canonical binding pocket were boxed. The sequence alignment was
generated by PROMALS3D software (Pei and Grishin, 2014) and colored by ClustalX
23
(Thompson et al., 1997). Electrostatic surface potential diagrams of (B) ZO-1(PDZ1) and (C)
PSD-95(PDZ-2), with positive (blue) and negative (red) electrostatic potentials mapped onto a
van der Waals surface diagram of the canonical peptide binding site. Coordinates from PDB
codes 4YYX and 3GSL were used, respectively. The color scale ranges between +20 kBT (red)
and −20 kBT (blue), where kB is Boltzmann’s constant and T is temperature. The canonical
binding pockets were hexagonal boxed.
Fig 2.
Direct interaction between ZO-1(PDZ1) and the flavonoids from Radix
scutellariae. Overlaid HSQC spectra of 0.1 mM ZO-1(PDZ1) in the absence (black) and presence
of 0.2 mM of baicalin (A) and baicalein (B) (red), respectively. (C) Chemical structure of the
selected flavonoids from Radix scutellariae used in this study. Normalized chemical shift
changes of baicalin (C) and baicalein (D). The changes induced by baicalin and baicalein were
mapped to the structure (F, G). Resonances representing residues with larger chemical shift
changes than the threshold values are mapped onto the ribbon model of mouse ZO-1(PDZ1)
(PDB: 2RRM). The threshold values are indicated by dashed lines in the graphs (D, E). The
residues at the interface are displayed in the figure. Normalized chemical shift changes of
wogonin (H).
Fig. 3.
Effects of baicalin and baicalein on cell shape and tight junction integrity of
MDCK II cells. Immunofluorescence staining of CLD-2 (A-E) and bright-field differential
interference contrast (DIC) images (F-J) are arrayed. Continuous 96 h exposure by 100 µM
baicalin (B, G) and baicalein (D, I) and 48 h exposure by 100 µM baicalin (C, H) and baicalein
24
(E, J) followed by 48 h incubation in media with DMSO. Scale bar = 20 μm.
Fig. 4.
Changes in the amount of protein and mRNA of CLD-2 after 100 μM baicalin or
baicalein treatment in MDCK II cells. Western blotting analysis (A, B) and quantitative real-time
PCR analysis (C). (A) Reduction of CLD-2 by 48 h treatment with baicalin and baicalein. (B)
Restoration of CLD-2 by 48 h incubation without flavonoids after exposure to them. (C) Relative
mRNA expression level of CLD-2 after 48 h of baicalin or baicalein treatment.
Fig. 5.
DIC and immunofluorescence microscopy of baicalin or baialein-treated MDCK II
cells for 48 h. DIC images (A-C), immunofluorescence staining with anti-ZO-1 (D-F) and antiOCLN (G-I) and rhodamine-phalloidin staining (J-L). Cells were treated with 100 μM baicalin
(B, E, H, K) and baicalein (C, F, I, L) for 48 h. Scale bar = 20 μm.
Fig. 6.
Effect of ALK-5 inhibitor SB431542 and ERK/MEK inhibitor U0126 against the
TJ-mitigating activity of baicalin and baicalein. Immunofluorescence staining with anti-CLD-2
antibody (A) and bright-field DIC images (B) are depicted. Cells were exposed to 100 μM
baicalin or 50 μM baicalein for 48 h in the presence or absence of 10 μM SB431542. For U0126,
cells were treated flavonoids with above concentration for 45 h and followed by addition of the
inhibitor (5 µM) for 3 h. DSO control (a, g) with SB431542 (b) or U0126 (h), baicalin exposure
(c, i) with SB431542 (d) or U0126 (j), and baicalein exposure (e, k) with SB431542 (f) or U0126
(l) are arrayed.
25
Fig. 7.
Analysis of cell morphology of living MDCK II cells from DIC images. The
treatment for 48 h, continuous 96 h, and 48 h exposure followed by 48 h DMSO wash
experiments were analyzed (A, B). The effect of ALK-5 inhibitor SB431542 (10 µM) and
ERK/MEK inhibitor U0126 (5 µM) against flavonoids exposure (C, D) were examined. The
length of long axis (A, C) and short axis (B, D) are shown.
Fig. 8.
Variations of the major flavonoids’ content with the different extraction method
from the dried chopped Radix scutellariae root. Reversed-phase HPLC chart of the simple hotwater extract of Radix scutellariae root (A), extraction method A (B) and extraction method B
(C) (see text) are shown. Arrows 1–4 indicate baicalin, wogonoside, baicalein, and wogonin.
Bright-field DIC images (D-F) and immunofluorescence staining of CLD-2 (G-I) of MDCK II
cells are arrayed. Cells were treated with extract A (E, H) and extract B (F, I) for 48 h.
Fig. 9.
Paracellular flux of fluorescence-labeled insulin of Caco-2 monolayer cells treated
with 300 μM baicalin or baicalein for 24 h.
Fig. 10.
Potential molecular mechanisms of baicalin and baicalein with the downregulation
of the integrity of tight junctions. (A) Our primary working hypothesis based on the PDZdomain-derived competitive interaction between CLD-2 and ZO-1 or LNX1. When Radix
scutellariae flavonoids interfere with the contact of ZO-1 to CLD-2, LNX1 excessively promotes
ubiquitination and endocytosis of CLD-2 from the membrane; thus, tight junctions are
downregulated. (B) Potential contribution of the other known and unknown signaling pathways
that caused tight junction downregulation and partly irreversible cell-shape changes.
26
*Credit Author Statement
Author Contributions: Conceptualization, H.H., and T.T.; Data Analysis, M. Hisada and T.T.;
Investigation, M. Hisada., M.N., M.Hiranuma, N.G., and T.T.; Resources, T.T. and N.G.;
Writing-Original Draft Preparation, H.H.; Writing-Review & Editing, H.H.; Visualization, T.T.;
Manuscript revision, T.T.; Supervision, H.H.; Project Administration, H.H.; Funding
Acquisition, H.H.
SUPPORING INFORMATION
Flavonoids from Chinese skullcap can modulate tight junction integrity by partly targeting the first
PDZ domain of zonula occludens-1 (ZO-1)
Misaki Hisada1, Minami Hiranuma1, Mio Nakashima2, Natsuko Goda1, Takeshi Tenno1,3, and Hidekazu
Hiroaki1,2,3,*
1, Graduate School of Pharmaceutical Sciences, Nagoya University, Furocho, Chikusa, Nagoya,
Aichi, 464-8601, Japan
2, Department of Biological Sciences, Faculty of Science, Nagoya University
3. BeCerllBar, LLC., Nagoya, Aichi, Japan.
Supplementary Figure 1.
Chemical structure of the all selected flavonoids from used in this study.
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