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Molecular characterization of a Newcastle disease virus isolate from a diseased chicken in the Philippines in 2017

Tran, Giang Thi Huong Mananggit, Milagros Reyes Abao, Lary Nel Bilbao Dong, Hieu Van Takeda, Yohei Ogawa, Haruko Imai, Kunitoshi 北海道大学

2021.02

概要

Newcastle disease (ND) is one of the most serious diseases affecting numerous avian species worldwide. However, data on the genetic characterization of ND virus (NDV) in the Philippines are limited. Herein, the complete sequences of the fusion (F) and hemagglutinin-neuraminidase (HN) genes of a NDV strain isolated in Central Luzon in 2017 were genetically analyzed. The results revealed that the field isolate belonged to subgenotype VII.2 and the genome encoded the amino acid sequence of the F0 protein proteolytic cleavage site motif (112R-R-Q-K-R-F117), indicating that it was a virulent strain. The current NDV strain was genetically related to Indonesian and Israeli NDV strains. Some amino acid substitutions were found in the transmembrane domain and neutralizing epitopes of the HN protein.

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参考文献

1) Alexander DJ. Newcastle disease and other avian paramyxoviruses. Revue scientifique et technique 19, 443–462, 2000.

2) Beguas RMC, Umali D V. Genetic characterization of Newcastle disease virus from broiler flocks in selected areas in central Luzon, Philippines. Philipp J Vet Med 55, 2018.

3) Collins MS, Bashiruddin JB, Alexander DJ. Deduced amino acid sequences at the fusion protein cleavage site of Newcastle disease viruses showing variation in antigenicity and pathogenicity. Arch Virol 128, 363–370, 1993.

4) Dimitrov KM, Abolnik C, Afonso CL, Albina E, Bahl J, Berg M, Briand FX, Brown IH, et al. Updated unified phylogenetic classification system and revised nomenclature for Newcastle disease virus. Infect Genet Evol 74, 103917, 2019.

5) Dimitrov KM, Afonso CL, Yu Q, Miller PJ. Newcastle disease vaccines-A solved problem or a continuous challenge? Vet Microbiol 206, 126–136, 2017.

6) Dimitrov KM, Ramey AM, Qiu X, Bahl J, Afonso CL. Temporal, geographic, and host distribution of avian paramyxovirus 1 (Newcastle disease virus). Infect Genet Evol 39, 22–34, 2016.

7) Ghalyanchilangeroudi A, Hosseini H, Jabbarifakhr M, Fallah Mehrabadi MH, Najafi H, Ghafouri SA, Mousavi FS, Ziafati Z, Modiri A. Emergence of a virulent genotype VIIi of Newcastle disease virus in Iran. Avian Pathol 47, 509–519, 2018.

8) Hall TA. BioEdit: a user-friendly biological sequence alignment editor and analysis program for Windows 95/98/NT. Nucl Acids Symp Ser 41, 95–98, 1999.

9) Ji Y, Liu T, Du Y, Cui X, Yu Q, Wang Z, Zhang J, Li Y, Zhu Q. A novel genotype VII Newcastle disease virus vaccine candidate generated by mutation in the L and F genes confers improved protection in chickens. Vet Microbiol 216, 99–106, 2018.

10) Kim BY, Lee DH, Kim MS, Jang JH, Lee YN, Park JK, Yuk SS, Lee JB, Park SY, Choi IS, Song CS. Exchange of Newcastle disease viruses in Korea: the relatedness of isolates between wild birds, live bird markets, poultry farms and neighboring countries. Infect Genet Evol 12, 478–482, 2012.

11) Mariappan AK, Munusamy P, Kumar D, Latheef SK, Singh SD, Singh R, Dhama K. Pathological and molecular investigation of velogenic viscerotropic Newcastle disease outbreak in a vaccinated chicken flocks. Virusdisease 29, 180–191, 2018.

12) McGinnes L, Sergel T, Morrison T. Mutations in the transmembrane domain of the HN protein of Newcastle disease virus affect the structure and activity of the protein. Virology 196, 101–110, 1993.

13) Miller PJ, Afonso CL, El Attrache J, Dorsey KM, Courtney SC, Guo Z, Kapczynski DR. Effects of Newcastle disease virus vaccine antibodies on the shedding and transmission of challenge viruses. Dev Comp Immunol 41, 505–513, 2013.

14) Miller PJ, Haddas R, Simanov L, Lublin A, Rehmani SF, Wajid A, Bibi T, Khan TA, Yaqub T, Setiyaningsih S, Afonso CL. Identification of new sub-genotypes of virulent Newcastle disease virus with potential panzootic features. Infect Genet Evol 29, 216–229, 2015.

15) Molia S, Boly IA, Duboz R, Coulibaly B, Guitian J, Grosbois V, Fournie G, Pfeiffer DU. Live bird markets characterization and trading network analysis in Mali: Implications for the surveillance and control of avian influenza and Newcastle disease. Acta Tropica 155, 77–88, 2016.

16) Mulisa DD, MK WK, Alemu RB, Keno MS, Furaso A, Heidari A, Chibsa TR, Chunde HC. Characterization of Newcastle Disease Virus and poultry-handling practices in live poultry markets, Ethiopia. SpringerPlus 3, 459, 2014.

17) OIE. Newcastle disease (Infection with Newcastle disease virus) (chap 3.3.14). In: OIE terrestrial manual 2018: manual of diagnostic tests and vaccines for terrestrial animals. World Organisation for Animal Health, Paris. eds. pp. 964–983, 2018.

18) Qin ZM, Tan LT, Xu HY, Ma BC, Wang YL, Yu an XY, Liu WJ. Path otypic al characterization and molecular epidemiology of Newcastle disease virus isolates from different hosts in China from 1996 to 2005. J Clin Microbiol 46, 601–611, 2008.

19) Rehmani SF, Wajid A, Bibi T, Nazir B, Mukhtar N, Hussain A, Lone NA, Yaqub T, Afonso CL. Presence of virulent Newcastle disease virus in vaccinated chickens in farms in Pakistan. J Clin Microbiol 53, 1715–1718, 2015.

20) Resplandor GJO, Umali DV. Molecular and serological detection of Newcastle disease virus in native chickens from selected live bird markets in Batangas, Philippines. Philipp Adv Anim Vet Sci 6, 1–7, 2017.

21) Romer-Oberdorfer A, Werner O, Veits J, Mebatsion T, Mettenleiter TC. Contribution of the length of the HN protein and the sequence of the F protein cleavage site to Newcastle disease virus pathogenicity. J Gen Virol 84, 3121–3129, 2003.

22) Roohani K, Tan SW, Yeap SK, Ideris A, Bejo MH, Omar AR. Characterisation of genotype VII Newcastle disease virus (NDV) isolated from NDV vaccinated chickens, and the efficacy of LaSota and recombinant genotype VII vaccines against challenge with velogenic NDV. J Vet Sci 16, 447–457, 2015.

23) Snoeck CJ, Owoade AA, Couacy-Hymann E, Alkali BR, Okwen MP, Adeyanju AT, Komoyo GF, Nakouné E, Le Faou A, Muller CP. High genetic diversity of Newcastle disease virus in poultry in West and Central Africa: cocirculation of genotype XIV and newly defined genotypes XVII and XVIII. J Clin Microbiol 51, 2250–2260, 2013.

24) Steward M, Vipond IB, Millar NS, Emmerson PT. RNA editing in Newcastle disease virus. J Gen Virol 74, 2539–2547, 1993.

25) Tamura K, Stecher G, Peterson D, Filipski A, Kumar S. MEGA6: molecular evolutionary genetics analysis version 6.0. Mol Biol Evol 30, 2725–2729, 2013.

26) Thompson JD, Higgins DG, Gibson TJ. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice. Nucleic Acids Res 22, 4673–4680, 1994.

27) Umali DV, Ito H, Suzuki T, Shirota K, Katoh H, Ito T. Molecular epidemiology of Newcastle disease virus isolates from vaccinated commercial poultry farms in non-epidemic areas of Japan. Virol J 10, 330, 2013.

28) Umali DV, Lopez ALM, Torres MIP, Umandal MC, Katoh H. Molecular characterization and phylogenetic analysis of Newcastle disease virus isolated from clinical cases of Newcastle disease in commercial layer farms in the Philippines. Philipp J Vet Med 54, 17–26, 2017.

29) Xiao S, Paldurai A, Nayak B, Samuel A, Bharoto EE, Prajitno TY, Collins PL, Samal SK. Complete genome sequences of Newcastle disease virus strains circulating in chicken populations of Indonesia. J Virol 86, 5969– 5970, 2012.

30) Xue C, Cong Y, Yin R, Sun Y, Ding C, Yu S, Liu X, Hu S, Qian J, Yuan Q, Yang M, Wang C, Ding Z. Genetic diversity of the genotype VII Newcastle disease virus: identification of a novel VIIj sub-genotype. Virus Genes 53, 63–70, 2017.

31) Zhang YY, Shao MY, Yu XH, Zhao J, Zhang GZ. Molecular characterization of chicken- derived genotype VIId Newcastle disease virus isolates in China during 2005-2012 reveals a new length in hemagglutinin- neuraminidase. Infect Genet Evol 21, 359–366, 2014.

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