Alberola M, 1996. Molecular structure of a gypsy element of
Drosophila subobscura (gypsyDs) constituting a degenerate form of insect
retroviruses. Nucleic Acids Res. 24:914-923.
Alex E, Natalie D, Chris G, Marte B and Deepa N, 2007.
Introduction Epigenetics. Nature. 447: 395.
Almeida R, Allshire RC, 2005. RNA silencing and genome regulation.
Trends Cell Biol. 15: 251–258.
Annalisa M, Tiziana A, Giusi R, Rosaria L, Antonio P, Silvia B,
Candida Z, Federica B, Ian B, Brittany A, 2014. Targeted DNA
methylation by homology-directed repair in mammalian cells. Transcription
reshapes methylation on the repaired gene. Nucleic Acids Res. 42(2):
804-821.
Antequera F, Tamame M, Villanueva JR, Santos T, 1984. DNA
methylation in the fungi. J. Biol. Chem. 259: 8033–8036.
Asha S, Soniya V, 2017. The sRNAome mining revealed existence of
unique signature small RNAs derived from 5.8SrRNA from Piper nigrum and
other plant lineages. Sci. Rep. 7: 41052.
Banks J, Masson P. and Fedoroff N, 1988. Molecular mechanisms in
the developmental regulation of the maize suppressor-mutator transposable
element. Genes Dev. 2:1364–1380.
Barkan A, Martienssen RA, 1991. Inactivation of maize transposon
Mu suppresses a mutant phenotype by activating an outward-reading
promoter near the end of Mu1. PNAS. 88:3502–3506.
Berger SL, Kouzarides T, Shiekhattar R, Shilatifard A, 2009. An
operational definition of epigenetics. Genes & Development. 23 (7): 781–3.
69
Bird A, 2002. DNA methylation patterns and epigenetic memory.
Genes Dev. 16(1):6-21.
Black JC, Van Rechem C, Whetstine R, 2012. Histone lysine
methylation dynamics: establishment, regulation, and biological impact.
Mol Cell. Nov 30;48(4):491-507.
Bond M and Baulcombe C, 2015. Epigenetic transitions leading to
heritable, RNA-mediated de novo silencing in Arabidopsis thaliana. Proc.
Natl. Acad. Sci. USA. 112: 917-922.
Borges F, and Martienssen A, 2015. The expanding world of small
RNAs in plants. Nat. Rev. Mol. Cell Biol. 16: 727-741.
Braman J,
2010. In Vitro Mutagenesis Protocols, Third Edition,
Humana Press.
Burroughs
et
al.,
2011.
Deep-sequencing
of
human
Argonaute-associated small RNAs provides insight into miRNA sorting and
reveals Argonaute association with RNA fragments of diverse origin. RNA
Biol.8:158–177.
Cambareri B, Jensen C, Schabtach E, Selker EU, 1989.
Repeat-induced
G-C
to
A-T
mutations
in
Neurospora.
Science.
244(4912):1571-1575.
Castel E, Martienssen A, 2013. RNA interference in the nucleus: roles
for small RNAs in transcription, epigenetics and beyond. Nat. Rev.
Genet14:100–112.
Cerutti H, Casas-Mollano A, 2006. On the origin and functions of
RNA-mediated silencing: from protists to man. Curr. Genet. 50:81–99.
70
Chandler V, Walbot V, 1986. DNA modification of a maize
transposable element correlates with loss of activity. Proc. Natl Acad. Sci.
USA. 83: 1767–1771.
Chandler V, February 2007. Paramutation: from maize to mice. Cell.
128 (4): 641–5.
Chen X, 2009. Small RNAs and their roles in plant development. Annu.
Rev. Cell Dev. Biol. 25:21–44.
Chiang P, Gordon R, Tal J, Zeng G, Doctor B, Pardhasaradhi K,
McCann P, 1996. S-Adenosyl methionine and methylation. FASEB J. 10 (4):
471–80.
Chomet P, Wessler S, Dellaporta S, 1987. Inactivation of the maize
transposable element Activator (Ac) is associated with DNA modification.
EMBO J.6: 295–302.
Clare J, Farabaugh P. 1985. Nucleotide sequence of a yeast Ty
element: evidence for an unusual mechanism of gene expression. PNAS.
82(9):2829-2833.
Cornellia G, Glenn M, Mark W, Pastan I, Howard B, 1982. The
Rous sarcoma virus long terminal repeat is a strong promoter when
introduced into a variety of eukaryotic cells by DNA-mediated transfection.
PNAS. 79: 6777-6781.
Cosgrove S, Boeke D, Wolberger C, 2004. Regulated Nucleosome
Mobility and the Histone Code. Nature Structural Molecular Biology. 11:
1037-1043.
Couch C, Kohn M, 2002. A multilocus gene genealogy concordant
with
host
preference
indicates
segregation
of
Magnaportheoryzae, from M. grisea. Mycologia. 94:683–693.
71
new
species,
Cox M, Nelson DR, Lehninger AL. 2005. Lehninger Principles of
Biochemistry. San Francisco: W.H. Freeman.
Cremer T, Cremer M, 2010. Chromosome Territories. Cold Spring
Harbor Perspectives in Biology. 2 (3): a003889–a003889.
Danuta J, Robert M, Marco G, Ricarda G, David G, Helena A,
Taiping C, En L, Jelena T, Magnus L, 2017. DNA methylation of
intragenicCpG islands depends on their transcriptional activity during
differentiation and disease. PNAS. 114: E7526-E7535.
Dean A, Talbot J, Ebbole J, Farman L, Mitchell K, Orbach J, Thon
M, Kulkarni R, Xu R, 2005. The genome sequence of the rice blast fungus
Magnaporthegrisea. Nature. 434:980–986.
Dorner J, and Coffin J, 1986. Determinants for receptor interaction
and cell killing on the avian retrovirus glycoprotein gp85. Cell. 45: 365–374.
Dorner J, and Coffin J, 1985. Molecular basis of host range variation
in avian retroviruses. J. Virol. 53: 32–39.
Dupont C, Armant R, Brenner A, 2009. Epigenetics: definition,
mechanisms and clinical perspective . Seminars in Reproductive Medicine. 27
(5): 351–357.
Ehrlich M, Gama M, Huang H, Midgett M, Kuo C, McCune A,
Gehrke C, 1982. Amount and distribution of 5-methylcytosine in human
DNA from different types of tissues or cells. Nucleic Acids Research. 10:
2709–2721.
Fang X and Qi Y, 2016. RNAi in Plants: An Argonaute-Centered
View. Plant Cell. 28: 272-285.
72
Farman L, Tosa Y, Nitta N, Leong S, 1996. MAGGY, a
retrotransposon in the genome of the rice blast fungus Magnaporthe grisea.
Mol. Gen. Genet. 251: 665–674.
Fraser J, Williamson I, Bickmore A, Dostie J, 2015. An overview of
genome organization and how we got there: From FISH to Hi-C. Microbiol.
Mol. Biol. Rev. 79(3): 347–372.
Fraser P, Bickmore W, 2007. Nuclear organization of the genome and
the potential for gene regulation. Nature. 447:413–7.
Freitag M, Lee DW, Kothe GO, Pratt RJ, Aramayo R, Selker EU,
2004. DNA Methylation Is Independent of RNA Interference in Neurospora.
Science. 304 (5679):1939.
Fu J, Hettler E, Wickes BL, 2005. Split marker transformation
increases homologous integration frequency in Cryptococcus neoformans.
Fungal Genet Biol. 43: 200–212.
Gowda M, Venu C, Raghupathy B, Nobuta K, Li H, Wing R,
Stahlberg E, Couglan S, Haudenschild D, Dean R, 2006. Deep and
comparative analysis of the mycelium and appressorium transcriptomes of
Magnaporthe grisea using MPSS, RL-SAGE, and oligoarray methods. BMC
Genomics. 7: 310.
Goyon C, Faugeron G. 1989. Targeted transformation of Ascobolus
immersus and de novo methylation of the resulting duplicated DNA
sequences. Mol Cell Biol. 9(7):2818-27
Grewal I, 2010. RNAi-dependent formation of heterochromatin and its
diverse functions. Curr. Opin. Genet. Dev. 20:134–141
Heng Z, Guohua W, Jiang Q, 2016. Transcription factors as readers
and effectors of DNA methylation. Nat Rev Genet. 17(9):551-655.
73
Hirochika H, Okamoto H, and Kakutani T, 2000. Silencing of
retrotransposons in Arabidopsis and reactivation by the ddm1 mutation. Plant
Cell.12: 357–369.
Hock J, Meister G, 2008. The Argonaute protein family. Genome Biol.
9: 210.
Hopp P, Prickett S, Price L, Libby T, March J, Paul J. 1988. A
Short Polypeptide Marker Sequence Useful for Recombinant Protein
Identification and Purification. Bio/Technology. 6 (10): 1204–10.
Haussecker D, Yong H, Ashley L, Poornima P, Andrew F, Mark K,
2010. Human tRNA-derived small RNAs in the global regulation of RNA
silencing. RNA. Apr;16(4):673-95.
Hua C, Zhao H, Guo S, 2018. Trans-Kingdom RNA Trans-Kingdom
RNA Silencing in Plant-Fungal Pathogen Interactions. Mol. Plant 11,
235–244, https://doi.org/10.1016/j.molp.2017.12.001.
Ikeda K, Nakayashiki H, Takagi M, Tosa Y, Mayama S, 2001. Heat
shock, copper sulfate and oxidative stress activate the retrotransposon
MAGGY resident in the plant pathogenic fungus Magnaporthe grisea. Mol
Genet Genomics. 266(2):318-325.
Jahner D, Jaenisch R, 1985. Retrovirus-induced de novo methylation
of flanking host sequences correlates with gene inactivity. Nature.
315:594–597.
Jain R, Iglesias N, Moazed D, 2016. Distinct Functions of Argonaute
Slicer in siRNA Maturation and Heterochromatin Formation.Mol Cell.
63(2):191-205.
Jayaprakash, D, Jabado O, Brown D, Sachidanandam R, 2011.
Identification and remediation of biases in the activity of RNA ligases in
small-RNA deep sequencing. Nucleic Acids Res. 39: e141.
74
Jeseničnik T, Štajner N, Radišek S, et al., 2019. RNA interference
core components identified and characterised in Verticillium nonalfalfae, a
vascular wilt pathogenic plant fungi of hops. Sci Rep 9, 8651.
Jenuwein T, Allis D, 2001. Translating the histone code. Science, 293,
1074-1080.
Kadotani N, Nakayashiki H, Tosa Y, Mayama S, 2003. RNA
silencing in the phytopathogenic fungus Magnaporthe oryzae. Mol Plant
Microbe Interact. 16: 769-775.
Kapitonov V, Jerzy J, 2008. A universal classification of eukaryotic
transposable elements implemented in Repbase. Nature Reviews Genetics. 9
(5): 411–2.
Kato H, Yamamoto M, Yamaguchi-Ozaki T, Kadouchi H, Iwamoto
Y, Nakayashiki H, Tosa Y, Mayama S, Mori N, 2000. Pathogenicity,
mating ability and DNA restriction fragment length polymorphisms of
Pyricularia populations isolated from Gramineae, Bambusideae and
Zingiberaceae plants. J. Gen. Plant Pathol. 66:30–47.
Kim N, Han J, Siomi C, 2009. Biogenesis of small RNAs in animals.
Nat. Rev. Mol. Cell Biol. 10:126–139.
Kim A, Terzian C, Santamaria P, et al., 1994. Retroviruses in
invertebrates: the gypsy retrotransposon is apparently an infectious retrovirus
of Drosophila melanogaster. PNAS. 91: 1285–1289.
Lee C, Li L, Gu W, Xue Z, Crosthwaite K, Pertsemlidis A, et al.,
2010.
Diverse
pathways
generate
microRNA-like
RNAs
and
Dicer-independent small interfering RNAs in fungi. Mol. Cell. 38: 803-814.
Lee S, Shibata Y, Malhotra A, Dutta A, 2009. A novel class of small
RNAs: tRNA-derived RNA fragments (tRFs). Genes Dev. 23: 2639-2649.
75
Li E, Beard C, Jaenisch R, 1993. Role for DNA methylation in
genomic imprinting. Nature. 366: 362–365.
Li W, Zhang P, Fellers JP, Friebe B, Gill BS, 2004. Sequence
composition, organization, and evolution of the core Triticeae genome. Plant J.
40: 500–11.
Li L, Chang S, Liu Y, 2010. RNA interference pathways in
filamentous fungi. Cell Mol. Life Sci. 67: 3849-3863.
Lippman Z, Gendrel AV, Black M, Vaughn MW, Dedhia N,
McCombie WR, Lavine K, Mittal V, May B, Kasschau KD, et al., 2004.
Role of transposable elements in heterochromatin and epigenetic control.
Nature. 430:471–476.
Lisa M, Thuc L, Guoping F, 2012. DNA Methylation and Its Basic
Function. Neuropsychopharmacology.38: 23–38.
Lister R, O'Malley RC, Tonti-Filippini J, Gregory D, Berry C,
Millar AH, Ecker R, 2008.
Highly integrated single-base resolution maps
of the epigenome in Arabidopsis. Cell. 133:523–536.
Macleod D, Charlton J, Mullins J, Bird A, 1994. Sp1 sites in the
mouse aprt gene promoter are required to prevent methylation of the CpG
islands. Genes Dev.8: 2282–2292.
Mallory C, Hinze A, Tucker R, Bouche N, Gasciolli V, Elmayan T,
Lauressergues D, Jauvion V, Vaucheret H, Laux T, 2009. Redundant and
specific roles of the ARGONAUTE proteins AGO1 and ZLL in development
and small RNA-directed gene silencing. PLoS Genet. 5: e1000646.
Marjori M, Rebecca M, 2014. RNA-directed DNA methylation: an
epigenetic pathway of increasing complexity Nature Reviews Genetics. 15:
394–408.
76
Matzke M, Kanno T, Huettel B, Daxinger L, Matzke AJ, 2006.
RNA-directed DNA methylation and Pol IVb in Arabidopsis. Cold Spring
Harb Symp Quant Biol. 71:449-59.
Matzke M, Mette MF, Jakowitsch J, Kanno T, Moscone EA, van
der Winden J, et al., 2001. A test for transvection in plants: DNA pairing
may lead to trans-activation or silencing of complex heteroalleles in tobacco.
Genetics.158:451–461.
Matzke A, Aufsatz W, Kanno T,
Mette M, Matzke J, 2002.
Homology-dependent gene silencing and host defense in plants. Adv Genet.
46: 235-75.
McClintock B. June 1950. The origin and behavior of mutable loci in
maize. PNAS. 36 (6): 344–55.
McHale T, Roberts I, Noble S, et al., 1992. CfT-I: an
LTR-retrotransposon in Cladosporiumfulvum, a fungal pathogen of tomato.
Mol. Gen. Genet. 233: 337–347.
Meng X, Bin Y, 2015. siRNA-directed DNA Methylation in
Plants.Curr Genomics. 16(1): 23–31.
Mette F, Aufsatz W, van der Winden J, Matzke A, Matzke J, 2000.
Transcriptional
silencing
and
promoter
methylation
triggered
by
double-stranded RNA. EMBO J. 19: 5194-5201.
Moazed, D, 2009. Small RNAs in transcriptional gene silencing and
genome defence. Nature. 457: 413-420.
Mochama P, Jadhav P, Neupane A, Marzano L, 2018. Mycoviruses as
triggers and targets of RNA silencing in white mold fungus Sclerotinia
sclerotiorum. Viruses. 10:214. doi: 10.3390/v10040214.
77
Murata N, Aoki T, Kusaba M, Tosa Y, Chuma I, 2014. Various
species of Pyricularia constitute a robust clade distinct from Magnaporthe
salvinii and its relatives in Magnaporthaceae. J. Gen. Plant Pathol. 80: 66–72.
Nakayashiki H, 2005. RNA silencing in fungi: mechanisms and
applications. FEBS Lett. 579: 5950-5957.
Nakayashiki H, Matsuo H, Chuma I, Ikeda K, Betsuyaku S,
Kusaba M, Tosa Y, Mayama S, 2001. Pyret, a Ty3/Gypsy retrotransposon in
Magnaporthe grisea contains an extra domain between the nucleocapsid and
protease domains. Nucleic Acids Res. 29 (20): 4106-4113.
Nakayashiki H, Kiyotomi K, Tosa Y, Mayama S, 1999.
Transposition of the retrotransposon MAGGY in heterologous species of
filamentous fungi. Genetics. 153: 693–703.
Neupane A, Feng C, Mochama K, Saleem H, Lee Y, 2019. Roles of
Argonautes and Dicers on Sclerotinia sclerotiorum Antiviral RNA
Silencing. Front. Plant Sci. 10:976. doi: 10.3389/fpls.2019.00976.
Neuvéglise C, Feldmann H, Bon E, Gaillardin C, Casaregola S,
2002. Genomic evolution of the long terminal repeat retrotransposons in
hemiascomycetous yeasts. Genome Res. 12(6):930-43.
Nunes C, Gowda M, Sailsbery J, Xue M, Chen F, Brown E, Oh Y,
Mitchell K, Dean A, 2011. Diverse and tissue-enriched small RNAs in the
plant pathogenic fungus, Magnaporthe oryzae. BMC Genomics. 12: 288.
Parker R, Sheth U, 2007. P bodies and the control of mRNA
translation and degradation. Mol Cell. 25: 635-646.
Pham K, Inoue Y, Vu B, Nguyen H, Nakayashiki H, 2015.
Correction:
MoSET1
Magnaportheoryzae)
(Histone
Regulates
H3K4
Global
Gene
Methyltransferase
Expression
Infection-Related Morphogenesis. PLOS Genetics. 11(12): e1005752.
78
in
during
Phillips T, 2008. The role of methylation in gene expression. Nature
Education 1, 116.
Phillips T, 2008. Small non-coding RNA and gene expression. Nature
Education 1(1):115.
Pray L, Zhaurova K, 2008. Barbara McClintock and the discovery of
jumping genes (transposons). Nature Education 1(1):169.
Qutob D, Chapman P, Gijzen M, 2013. Transgenerational gene
silencing causes gain of virulence in a plant pathogen. Nature commun. 4,
1349–1349, https://doi.org/10.1038/ncomms2354.
Keith S, Martienssen R, 2007. Transposable elements and the epigenetic
regulation of the genome.Nature Reviews Genetics.8:272-285.
Raman V, Simon S, Demirci F, Nakano M, Meyers B, Donofrio M,
2017. Small RNA functions are required for growth and development of
magnaporthe
oryzae.
Mol.
Plant-Microbe
Interact.
30:517–530.
doi: 10.1094/MPMI-11-16-0236-R.
Reik W, 2007. Stability and flexibility of epigenetic gene regulation in
mammalian development. Nature. 447 (7143): 425–32.
Saigo K, Kugimiya W, Matsuo Y, et al., 1984. Identification of the
coding sequence for a reverse transcriptase-like enzyme in a transposable
genetic element in Drosophila melanogaster. Nature. 312: 659–661.
Schnable et al., 2009. The B73 maize genome: complexity, diversity,
and dynamics. Science. 326:1112–1115.
Singer-Sam J, Riggs A, In J, Saluz H, 1993. DNA Methylation:
Molecular Biology and Biological Significance. BirkhauserVerlag, Boston,
MA. 358–384.
79
Siomi C, Sato K, Pezic D, Aravin A, 2011. PIWI-interacting small
RNAs: the vanguard of genome defence. Nat. Rev. Mol. Cell. Biol. 12:
246-258.
Slotkin K, Martienssen R, 2007. Transposable elements and the
epigenetic regulation of the genome. Nat. Rev. Genet. 8:272–285.
Song U, Gerasimova T, Kurkulos M, Boeke J, Corces V, 1994.
Anenv-like protein encoded by a Drosophila retroelement: evidence that
gypsy is an infectious retrovirus. Genes Dev. 8: 2046–2057.
Strahl D, Allis D, 2000. The Language of Covalent Histone
Modifications. Nature. 403: 41-45.
Teixeira K, Heredia F, Sarazin A, Roudier F, Boccara M, Ciaudo C,
Cruaud C, Poulain J, Berdasco M, Fraga MF, et al., 2009. A role for
RNAi in the selective correction of DNA methylation defects. Science.
323:1600–1604.
Tolia H, Joshua-Tor L, 2007. Slicer and the argonautes. Nat. Chem.
Boil., 3: 36-43.
Torres-Martínez S, Ruiz-Vázquez M, 2017. The RNAi Universe in
Fungi: A Varied Landscape of Small RNAs and Biological Functions. Annu.
Rev.
of
71,
Microbiol.
371–391,
https://doi.org/10.1146/annurev-micro-090816-093352
Tosa Y, Nakayashiki H, Hyodo H, Mayama S, Kato H, Leong SA.
1995. Distribution of retrotransposon MAGGY in Pyricularia species. Ann.
Phytopathol. Soc. Jpn. 61:549–554.
Murata T, Kadotani N, Yamaguchi M, Tosa Y, Mayama S, H. 2007.
siRNA-dependent and -independent post-transcriptional cosuppression of the
LTR-retrotransposon
MAGGY
in
the
phytopathogenic
Magnaportheoryzae. Nucleic Acid Res. 35(18): 5987–5994.
80
fungus
Tristem M, Kabat P, Herniou E, Karpas A, Hill F, 1995. Easel, a
gypsy LTR-retrotransposon in the Salmonidae.
Mol. Gen. Genet. 249:
229–236.
Tucker L, 2001. Methylated cytosine and the brain: a new base for
neuroscience. Neuron. 30: 649–652.
Ulrike S, Olivia D Laura L, Walter H, Dixie M, Brian S, Christine
L, 2009. Human Endogenous Retroviral Long Terminal Repeat Sequences as
Cell Type-Specific Promoters in Retroviral Vectors. Journal of Virology.
12643-12650.
Urashima S, Hashimoto Y, Don D, Kusaba M, Tosa Y, Nakayashiki
H, and Mayama S, 1999. Molecular analysis of the wheat blast population in
Brazil with a homolog of retrotransposon MGR583. Annu. Phytopathol. Soc.
Jpn. 65, 429-436
Vasquero A, Loyola A, Reinberg D, 2003. The Constantly Changing
Face of Chromatin. Science of Aging Knowledge Environment. 14:RE4.
Voytas F, Ausubel F. 1988.A copia-like transposable element family
in Arabidopsis thaliana. Nature. 336: 242–244.
Vu
B,
Pham
K,
Nakayashiki
H,
2013.
Substrate-induced
transcriptional activation of the MoCel7C cellulase gene is associated with
methylation of histone H3 at lysine 4 in the rice blast fungus Magnaporthe
oryzae. Appl Environ Microbiol. 79: 6823-6832.
Wagner R, Busche S, Ge B, Kwan T, Pastinen T, Blanchette M,
2014. The relationship between DNA methylation, genetic and expression
inter-individual variation in untransformed human fibroblasts. Genome
Biology. 15(2):R37.
Wang H, Zhang X, Liu J, Kiba T, Woo J, Ojo T, Hafner M, Tuschl
T, Chua H, Wang J, 2011. Deep sequencing of small RNAs specifically
81
associated with Arabidopsis AGO1 and AGO4 uncovers new AGO functions.
Plant J. 67(2):292-304.
Wang Q, An B, Hou X, Guo Y, Luo H. He C, 2018. Dicer-like
proteins regulate the growth, conidiation, and pathogenicity of Colletotrichum
gloeosporioides
from
Hevea
brasiliensis.
Front.
Microbiol.
8:2621.
doi: 10.3389/fmicb.2017.02621.
Wei
H, Zhou B, Zhang F, Tu Y, Hu Y, Zhang B, Zhai Q, 2013.
Profiling and identification of small rDNA-derived RNAs and their potential
biological functions. PLoS One. 8: e56842.
Weiberg A, et al., 2013. Fungal Small RNAs Suppress Plant Immunity by
Hijacking Host RNA Interference Pathways. Science (New York, N.Y.) 342,
118–123, https://doi.org/10.1126/science.1239705
Wicker T, Sabot F, Hua-Van A, Bennetzen JL, Capy P, Chalhoub
B, Flavell A, Leroy P, Morgante M, Panaud O, et al., 2007. A unified
classification system for eukaryotic transposable elements. Nat Rev Genet.
8:973–982.
Wu J, Yang Z, Wang Y, Zheng L, Ye R, Ji Y, Zhao S, Ji S, Liu R,
Xu L, et al., 2015. Viral-inducible Argonaute18 confers broad-spectrum virus
resistance in rice by sequestering a host microRNA. eLife. 4.
Yoder J, Walsh C, Bestor T, 1997. Cytosine methylation and the
ecology of intragenomic parasites. Trends Genet.13:335–340.
Youngson RM, 2006. Collins Dictionary of Human Biology. Glasgow:
HarperCollins.
Zentner E, Henikoff S, 2013. Regulation of Nucleosome Dynamics by
Histone Modifications. Nature Structural & Molecular Biology, 20, 259-266.
http://dx.doi.org/10.1038/nsmb.2470
82
Zhang X, Shiu S, Cal A, Borevitz JO, 2008. Global analysis of
genetic, epigenetic and transcriptional polymorphisms in Arabidopsis thaliana
using whole genome tiling arrays. PLoS Genet. 4
Zhang X, 2008. The epigenetic landscape of plants. Science.
320:489–492.
Zhu H, Hu F, Wang R, Zhou X, Sze H, Liou W, Barefoot A,
Dickman M, Zhang X, 2011. Arabidopsis Argonaute10 specifically
sequesters miR166/165 to regulate shoot apical meristem development. Cell
145: 242-256.
Zilberman D, Gehring M, Tran RK, Ballinger T, Henikoff S, 2007.
Genome-wide analysis of Arabidopsis thaliana DNA methylation uncovers an
interdependence between methylation and transcription. Nat Genet. 39:61–69.
83
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