1 A. L. Lehninger, D. L. Nelson and M. M. Cox, Lehninger
principles of biochemistry, Worth Publishers, New York, 2000.
2 Proteomic and metabolomic approaches to biomarker discovery,
ed. H. Issaq, Academic Press, London, 2013.
3 M. C. Brahimi-Horn and J. Pouyss´
egur, FEBS Lett., 2007, 581,
3582–3591.
4 J. R. Casey, S. Grinstein and J. Orlowski, Nat. Rev. Mol. Cell
Biol., 2010, 11, 50–61.
5 X. Zhang, Y. Lin and R. J. Gillies, J. Nucl. Med., 2010, 51,
1167–1170.
6 M. Karnebogen, D. Singer, M. Kallerhoff and R. H. Ringert,
Thermochim. Acta, 1993, 229, 147–155.
7 A. Sigaeva, Y. Ong, V. G. Damle, A. Morita, K. J. van der Laan
and R. Schirhagl, Acc. Chem. Res., 2019, 52, 1739–1749.
8 L. D. Lavis and R. T. Raines, ACS Chem. Biol., 2008, 3, 142–
155.
9 H. Kobayashi, M. Ogawa, R. Alford, P. L. Choyke and
Y. Urano, Chem. Rev., 2010, 110, 2620–2640.
10 T. Ueno and T. Nagano, Nat. Methods, 2011, 8, 642–645.
11 J. Chan, S. C. Dodani and C. J. Chang, Nat. Chem., 2012, 4,
973–984.
12 T. Terai and T. Nagano, P¨
ugers Archiv: European Journal of
Physiology, 2013, 465, 347–359.
13 A. T. Aron, K. M. Ramos-Torres, J. A. Cotruvo and C. J. Chang,
Acc. Chem. Res., 2015, 48, 2434–2442.
14 J. V. Jun, D. M. Chenoweth and E. J. Petersson, Org. Biomol.
Chem., 2020, 18, 5747–5763.
15 J. Han and K. Burgess, Chem. Rev., 2010, 110, 2709–2728.
16 Y. Yue, F. Huo, S. Lee, C. Yin and J. Yoon, Analyst, 2017, 142,
30–41.
17 J. T. Hou, W. X. Ren, K. Li, J. Seo, A. Sharma, X. Q. Yu and
J. S. Kim, Chem. Soc. Rev., 2017, 46, 2076–2090.
18 M. Shamsipur, A. Barati and Z. Nematifar, J. Photochem.
Photobiol., C, 2019, 39, 76–141.
19 A. Steinegger, O. S. Woleis and S. M. Borisov, Chem. Rev.,
2020, 120, 12357–12489.
20 K. Kikuchi, H. Takakusa and T. Nagano, TrAC, Trends Anal.
Chem., 2004, 23, 407–415.
21 A. P. Demchenko, Anal. Biochem., 2005, 343, 1–22.
22 J. Young, Work. U. S. A., 2003, 7, 100–102.
23 H. Wang, E. Nakata and I. Hamachi, ChemBioChem, 2009, 10,
2560–2577.
24 T. Doussineau, A. Schulz, A. Lapresta-Fernandez, A. Moro,
S. K¨
orsten, S. Trupp and G. J. Mohr, Chem.–Eur. J., 2010,
16, 10290–10299.
25 A. P. Demchenko, J. Fluoresc., 2010, 20, 1099–1128.
26 L. Yuan, W. Lin, K. Zheng and S. Zhu, Acc. Chem. Res., 2013,
46, 1462–1473.
27 X. Huang, J. Song, B. C. Yung, X. Huang, Y. Xiong and
X. Chen, Chem. Soc. Rev., 2018, 47, 2873–2920.
Chem. Sci., 2021, 12, 8231–8240 | 8239
A Self-archived copy in
Kyoto University Research Information Repository
https://repository.kulib.kyoto-u.ac.jp
Open Access Article. Published on 08 May 2021. Downloaded on 6/1/2022 6:19:07 AM.
This article is licensed under a Creative Commons Attribution-NonCommercial 3.0 Unported Licence.
Chemical Science
28 L. D. Lavis, Annu. Rev. Biochem., 2017, 86, 825–843.
29 E. Abbe, Beitr¨
age zur Theor. des Mikroskops und der
mikroskopischen Wahrnehmung, Arch. Mikrosk. Anat.,
1873, 9, 413–420.
30 S. W. Hell, Nat. Biotechnol., 2003, 21, 1347–1355.
31 S. W. Hell, Nat. Methods, 2009, 6, 24–32.
32 O. S. Woleis, Chem. Soc. Rev., 2015, 44, 4743–4768.
33 J. L. Kolanowski, F. Liu and E. J. New, Chem. Soc. Rev., 2018,
47, 195–208.
34 P. Reineck and B. C. Gibson, Adv. Opt. Mater., 2017, 5,
1600446.
35 P. W. K. Rothemund, Nature, 2006, 440, 297–302.
36 V. Linko, S. Nummelin, L. Aarnos, K. Tapio, J. Toppari and
M. Kostiainen, Nanomaterials, 2016, 6, 139.
37 A. Rajendran, M. Endo and H. Sugiyama, Angew. Chem., Int.
Ed., 2012, 51, 874–890.
38 A. Rajendran, E. Nakata, S. Nakano and T. Morii,
ChemBioChem, 2017, 18, 696–716.
39 T. A. Ngo, H. Dinh, T. M. Nguyen, F. F. Liew, E. Nakata and
T. Morii, Chem. Commun., 2019, 55, 12428–12466.
40 C. Lin, R. Jungmann, A. M. Leifer, C. Li, D. Levner,
G. M. Church, W. M. Shih and P. Yin, Nat. Chem., 2012, 4,
832–839.
41 J. B. Woehrstein, M. T. Strauss, L. L. Ong, B. Wei,
D. Y. Zhang, R. Jungmann and P. Yin, Sci. Adv., 2017, 3,
18–26.
42 S. L. Schmid and S. D. Conner, Nature, 2003, 422, 37–44.
43 T. Tørring, N. V Voigt, J. Nangreave, H. Yan and K. V Gothelf,
Chem. Soc. Rev., 2011, 40, 5636–5646.
44 J. V. V. Arales, H. Hirose, M. Akishiba, S. Tsuji, M. Imanishi
and S. Futaki, Bioconjugate Chem., 2020, 31, 547–553.
45 A. S. Desai, M. R. Hunter and A. N. Kapustin, Philos. Trans. R.
Soc., B, 2019, 374, 20180156.
8240 | Chem. Sci., 2021, 12, 8231–8240
View Article Online
Edge Article
46 L. Li, T. Wan, M. Wan, B. Liu, R. Cheng and R. Zhang, Cell
Biol. Int., 2015, 39, 531–539.
47 S. Weiss, Proc. Natl. Acad. Sci. U. S. A., 2000, 97, 8747–8749.
48 A. Ora, E. J¨
arvihaavisto, H. Zhang, H. Auvinen, H. A. Santos,
M. A. Kostiainen and V. Linko, Chem. Commun., 2016, 52,
14161–14164.
49 X. Shen, Q. Jiang, J. Wang, L. Dai, G. Zou, Z. G. Wang,
W. Q. Chen, W. Jiang and B. Ding, Chem. Commun., 2012,
48, 11301–11303.
50 D. Balakrishnan, G. D. Wilkens and J. G. Heddle,
Nanomedicine, 2019, 14, 911–925.
51 P. Wang, T. A. Meyer, V. Pan, P. K. Dutta and Y. Ke, Chem,
2017, 2, 359–382.
52 A. Udomprasert and T. Kangsamaksin, Cancer Sci., 2017,
108, 1535–1543.
53 A. H. Okholm, J. S. Nielsen, M. Vinther, R. S. Sørensen,
D. Schaffert and J. Kjems, Methods, 2014, 67, 193–197.
54 J. K. Kiviaho, V. Linko, A. Ora, T. Tiainen, E. J¨
arvihaavisto,
J. Mikkil¨
a, H. Tenhu, Nonappa and M. A. Kostiainen,
Nanoscale, 2016, 8, 11674–11680.
55 S. Ramakrishnan, H. Ij¨
as, V. Linko and A. Keller, Comput.
Struct. Biotechnol. J., 2018, 16, 342–349.
56 D. Wang, Z. Da, B. Zhang, M. A. Isbell, Y. Dong, X. Zhou,
H. Liu, J. Y. Y. Heng and Z. Yang, RSC Adv., 2015, 5,
58734–58737.
57 N. Wu and I. Willner, Nano Lett., 2016, 16, 6650–6655.
58 S. Modi, M. G. Swetha, D. Goswami, G. D. Gupta, S. Mayor
and Y. Krishnan, Nat. Nanotechnol., 2009, 4, 325–330.
59 I. Canton and G. Battaglia, Chem. Soc. Rev., 2012, 41, 2718–
2739.
60 V. Weissig, Liposomes: methods and protocols. Volume 1,
Humana Press, Totowa, N.J., 2010, vol. 1.
© 2021 The Author(s). Published by the Royal Society of Chemistry
...