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Figure Legends
Fig. 1. Microarray analysis of gene expression profiling
Microarray profiling of chondrocytes showed genes that are commonly or conflictingly
regulated by CTS and µG (n = 1 per group). Category I: genes upregulated by both CTS and
µG, Category Ⅱ: genes upregulated by CTS and downregulated by µG, Category Ⅲ: genes
upregulated by µG and downregulated by CTS, and Category Ⅵ: genes downregulated by
both CTS and µG.
Fig. 2. Fat1 mRNA gene expression in response to CTS and µG
The graphs show the expression of Fat1 in each group. Data are shown as the mean ± SD of 4
wells per group. *P < 0.05.
Fig. 3. Immunocytochemical staining of β-tubulin
Representative images of immunocytochemical staining shows (A-D) β-tubulin.in each group
Scale bars = 50 µm.
Fig. 4. Immunocytochemical staining of F-actin and Fat1
Representative images of immunocytochemical staining shows (A-B) F-actin, (E-H) Fat1, (IL) nucleus staining-DAPI, and (M-P) Merge in each group. Scale bars = 50 µm. The graph
26
right shows staining intensity of (Q and R) F-Actin in whole cell region (n =150-200 cells per
group), (S and T) Fat1 in whole cell region (n = 60-70 cells per group), and (U and V) Fat1 in
the cell cortical region (n =60-70 cells per group) in each group. Data are shown as the mean
± SD. *P < 0.05.
27
Figure 1
28
Figure 2
29
Figure 3
30
Figure 4
31
Table 1. GO terms of genes upregulated by both CTS and µG
symbol
description
GO biological process
Traf3ip3
TRAF3 interacting protein 3
GO:0008150 (biological process)
S100g
S100 calcium binding protein G
Unavailable annotation
Kell blood group precursor
(McLeod phenotype) homolog
GO:0006865 (amino acid transport)
GO:0006874 (cellular calcium ion homeostasis)
GO:0008361 (regulation of cell size)
GO:0010961 (cellular magnesium ion homeostasis)
GO:0042552 (myelination)
GO:0048741 (skeletal muscle fiber development)
prokineticin receptor 1
GO:0007165 (signal transduction)
GO:0007186 (G-protein coupled receptor protein signaling pathway)
GO:0007623 (circadian rhythm)
GO:0043066 (negative regulation of apoptotic process)
GO:0060976 (coronary vasculature development)
Xk
Prokr1
32
Table 2. GO terms of genes upregulated by CTS and downregulated by µG
symbol
description
GO biological process
GO:0002088 (lens development in camera-type eye)
GO:0003382 (epithelial cell morphogenesis)
GO:0003412 (establishment of epithelial cell apical/basal polarity
involved in camera-type eye morphogenesis)
GO: 0007015 (actin filament organization)
GO:0007155 (cell adhesion)
Fat1
Il17rb
FAT tumor suppressor homolog 1
interleukin 17 receptor B
GO: 0007156(homophilic cell adhesion via plasma membrane adhesion
molecules)
GO: 0007163 (establishment and/or maintenance of cell polarity)
GO: 0016337 (cell-cell adhesion)
GO:0043010 (camera-type eye development)
GO:0045197 (establishment or maintenance of epithelial cell apical/basal
polarity)
GO:0048593 (camera-type eye morphogenesis)
GO:0050729 (positive regulation of inflammatory response)
GO:0098609 (cell-cell adhesion)
GO:0019221 (cytokine-mediated signaling pathway cytokine-mediated
signaling pathway)
GO:0032736 (positive regulation of interleukin-13 production)
GO:0032754 (positive regulation of interleukin-5 production)
GO:0050729 (positive regulation of inflammatory response)
33
Table 3. GO terms of genes upregulated by µG and downregulated by CTS
symbol
Sfrp2
description
GO biological process
secreted frizzled-related protein 2
GO:0001569 (branching involved in blood vessel morphogenesis)
GO:0001756 (somitogenesis)
GO:0002063 (chondrocyte development)
GO:0003214 (cardiac left ventricle morphogenesis)
GO:0007584 (response to nutrient)
GO:0010975 (regulation of neuron projection development)
GO:0010719 (negative regulation of epithelial to mesenchymal transition)
GO:0010667 (negative regulation of cardiac muscle cell apoptotic process)
GO:0010950 (positive regulation of endopeptidase activity)
GO:0021915 (neural tube development)
GO:0030111 (regulation of Wnt signaling pathway)
GO:0030178 (negative regulation of Wnt signaling pathway)
GO:0030199 (collagen fibril organization)
GO:0030514 (negative regulation of BMP signaling pathway)
GO:0003151 (outflow tract morphogenesis)
GO:0031668 (cellular response to extracellular stimulus)
GO:0035567 (non-canonical Wnt signaling pathway)
GO:0036342 (post-anal tail morphogenesis)
GO:0042493 (response to drug)
GO:0042733 (embryonic digit morphogenesis)
34
GO:0045600 (positive regulation of fat cell differentiation)
GO:0042662 (negative regulation of mesodermal cell fate specification)
GO:0043508 (negative regulation of JUN kinase activity)
GO:0046546 (development of primary male sexual characteristics)
GO:0048546 (digestive tract morphogenesis)
GO:0050732 (negative regulation of peptidyl-tyrosine phosphorylation)
GO:0060028 (convergent extension involved in axis elongation)
GO:0060349 (bone morphogenesis)
GO:0061056 (sclerotome development)
GO:0061185 (negative regulation of dermatome development)
GO:0071425 (hematopoietic stem cell proliferation)
GO:0071481 (cellular response to X-ray)
GO:0090175 (regulation of establishment of planar polarity)
GO:0090179 (planar cell polarity pathway involved in neural tube closure)
GO:0090244 (Wnt signaling pathway involved in somitogenesis)
GO:1902042 (negative regulation of extrinsic apoptotic signaling pathway
via death domain receptors)
GO:1904956 (regulation of midbrain dopaminergic neuron differentiation)
GO:2000035 (regulation of stem cell division)
GO:2000041 (negative regulation of planar cell polarity pathway involved
in axis elongation)
Gpr12
G-protein coupled receptor 12
GO:0006874 (calcium ion homeostasis)
GO:0007165 (signal transduction)
GO:0007186 (G-protein coupled receptor protein signaling pathway)
35
GO:0019222 (regulation of metabolic process)
Slc8a1
solute carrier family 8
(sodium/calcium exchanger),
member 1
GO:0001892 (embryonic placenta development)
GO:0002026 (regulation of the force of heart contraction)
GO:0002027 (regulation of heart rate)
GO:0002028 (regulation of sodium ion transport)
GO:0006874 (cellular calcium ion homeostasis)
GO:0006883 (cellular sodium ion homeostasis)
GO:0007154 (cell communication)
GO:0007584 (response to nutrient)
GO:0010763 (positive regulation of fibroblast migration)
GO:0010881 (regulation of cardiac muscle contraction by regulation of the
release of sequestered calcium ion)
GO:0014829 (vascular associated smooth muscle contraction)
GO:0021537 (telencephalon development)
GO:0030001 (metal ion transport)
GO:0030501 (positive regulation of bone mineralization)
GO:0033198 (response to ATP)
GO:0034614 (cellular response to reactive oxygen species)
GO:0035050 (embryonic heart tube development)
GO:0035902 (response to immobilization stress)
GO:0035994 (response to muscle stretch)
GO:0036376 (sodium ion export across plasma membrane)
GO:0042493 (response to drug)
GO:0042542 (response to hydrogen peroxide)
36
GO:0044557 (relaxation of smooth muscle)
GO:0048747 (muscle fiber development)
GO:0051481 (negative regulation of cytosolic calcium ion concentration)
GO:0051924 (regulation of calcium ion transport)
GO:0055013 (cardiac muscle cell development)
GO:0055074 (calcium ion homeostasis)
GO:0060048 (cardiac muscle contraction)
GO:0060402 (calcium ion transport into cytosol)
GO:0070509 (calcium ion import)
GO:0071313 (cellular response to caffeine)
GO:0071320 (cellular response to cAMP)
GO:0071901 (negative regulation of protein serine/threonine kinase
activity)
GO:0086036 (regulation of cardiac muscle cell membrane potential)
GO:0086064 (cell communication by electrical coupling involved in cardiac
conduction)
GO:0098703 (calcium ion import across plasma membrane)
GO:0098719 (sodium ion import across plasma membrane)
GO:0098735 (positive regulation of the force of heart contraction)
GO:0099566 (regulation of postsynaptic cytosolic calcium ion
concentration)
GO:1901660 (calcium ion export)
37
Fscn2
Dnahc6
Krt8
fascin homolog 2, actin-bundling
protein, retinal
GO:0007163 (establishment or maintenance of cell polarity)
GO:0042462 (eye photoreceptor cell development)
GO:0051017(actin filament bundle assembly)
dynein, axonemal, heavy chain 6
GO:0003341 (cilium movement)
GO:0007018(microtubule-based movement)
GO:0060285 (cilium-dependent cell motility)
keratin 8
GO:0000904 (cell morphogenesis involved in differentiation)
GO:0033209 (tumor necrosis factor-mediated signaling pathway)
GO:0045214 (sarcomere organization)
GO:0051599 (response to hydrostatic pressure)
GO:0051707 (response to other organism)
GO:0060706 (cell differentiation involved in embryonic placenta
development)
GO:0097191 (extrinsic apoptotic signaling pathway)
GO:0097284 (hepatocyte apoptotic process)
2210403B10Rik RIKEN cDNA 2210403B10 gene
GO:0007165 (signal transduction)
Olfr1218
GO:0007165 (signal transduction)
GO:0007186 (G-protein coupled receptor protein signaling pathway)
GO:0007608 (sensory perception of smell)
olfactory receptor 1218
GO:0050911 (detection of chemical stimulus involved in sensory
perception of smell)
Prap1
proline-rich acidic protein 1
Unavailable annotation
38
AK122525
Phospho1
cDNA sequence AK122525
Unavailable annotation
phosphatase, orphan 1
GO:0001958 (endochondral ossification)
GO:0030500 (regulation of bone mineralization)
GO:0035630 (bone mineralization involved in bone maturation)
39
Table 4. GO terms of genes downregulated by both CTS and µG
symbol
description
GO biological process
Serpina3k
serine (or cysteine) peptidase
inhibitor, clade A, member 3K
GO:0010466 (negative regulation of peptidase activity)
GO:0010951 (negative regulation of endopeptidase activity)
GO:0034097 (response to cytokine)
GO:0043434 (response to peptide hormone)
Klhl4
kelch-like 4 (Drosophila)
GO:0008150 (biological_process)
Me3
malic enzyme 3, NADP(+)dependent, mitochondrial
GO:0006090(pyruvate metabolic process)
GO:0006108(malate metabolic process)
1700093K21Rik RIKEN cDNA 1700093K21 gene
GO:0008150 (biological_process)
4930528A17Rik RIKEN cDNA 4930528A17 gene
Unavailable annotation
Gsta3
glutathione S-transferase, alpha 3
GO:0001657 (ureteric bud development)
GO:0006749 (glutathione metabolic process)
GO:0006805 (xenobiotic metabolic process)
GO:0046223 (aflatoxin catabolic process)
Slamf7
SLAM family member 7
GO:0002250 (adaptive immune response)
GO:0032814 (regulation of natural killer cell activation)
GO:0045087 (innate immune response)
Slitrk4
SLIT and NTRK-like family,
member 4
GO:0007409 (axonogenesis)
GO:0050807 (egulation of synapse organization)
GO:0051965 (positive regulation of synapse assembly)
GO:1905606 (regulation of presynapse assembly)
40
...