第 1 章
Arsuffi G, Braybrook SA. Acid growth: an ongoing trip. J Exp Bot. 2018; 69(2):137-146.
Hager A, Menzel H, Krauss A. Versuche und Hypothese zur Primarwirkung des Auxin beim Streckungswachstum. Planta.1971;100:47-75.
Hayashi K. The interaction and integration of auxin signaling components. Plant Cell Physiol. 2012; 53: 965-975.
Tian H, Lv B, Ding T, Bai M, Ding Z. Auxin-BR Interaction Regulates Plant Growth and Development. Front Plant Sci. 2018;8:2256.
Szemenyei H, Hannon M, Long JA. TOPLESS mediates auxin-dependent transcriptional repression during Arabidopsis embryogenesis. Science. 2008; 319:1384-1386.
Fendrych M, Leung J, Friml J. TIR1/AFB-Aux/IAA auxin perception mediates rapid cell wall acidification and growth of Arabidopsis hypocotyls. Elife. 2016; 5. pii: e19048.
Spartz AK, Ren H, Park MY, Grandt KN, Lee SH, Murphy AS, Sussman MR, Overvoorde PJ, Gray WM. SAUR Inhibition of PP2C-D Phosphatases Activates Plasma Membrane H+-ATPases to promote Cell Expansion in Arabidopsis. Plant Cell. 2014; 26(5):2129-2142.
Takahashi K, Hayashi K, Kinoshita T. Auxin activates the plasma membrane H+-ATPase by phosphorylation during hypocotyl elongation in Arabidopsis. Plant Physiol. 2012; 159(2):632-41.
Cosgrove, D.J. Loosening of plant cell walls by expansins. Nature. 2000; 407: 321–326.
Philippar K, Ivashikina N, Ache P, Christian M, Lüthen H, Palme K, Hedrich R. Auxin activates KAT1 and KAT2, two K+-channel genes expressed in seedlings of Arabidopsis thaliana. Plant J. 2004 ;37(6):815-27.
Majda M, Robert S. The Role of Auxin in Cell Wall Expansion. Int J Mol Sci. 2018 ;19(4). pii: E951.
Mockaitis K, Estelle M. Auxin receptors and plant development: a new signaling paradigm. Annu Rev Cell Dev Biol. 2008;24:55-80.
Pelletier S, Van Orden J, Wolf S, Vissenberg K, Delacourt J, Ndong YA, Pelloux J, Bischoff V, Urbain A, Mouille G, Lemonnier G, Renou JP, Höfte H. A role for pectin de-methylesterification in a developmentally regulated growth acceleration in dark-grown Arabidopsis hypocotyls. New Phytol. 2010;188(3):726-39.
Li J, Nagpal P, Vitart V, McMorris TC, Chory J. A role for brassinosteroids in light-dependent development of Arabidopsis. Science. 1996; 272: 398-401.
Belkhadir Y and Jaillais Y. The molecular circuitry of brassinosteroid signaling. New Phytol. 2015; 206(2):522-40. Caesar K, Elgass K, Chen Z, Huppenberger P, Witthöft J, Schleifenbaum F, Blatt
MR, Oecking C, Harter K. A fast brassinolide-regulated response pathway in the plasma membrane of Arabidopsis thaliana. Plant J. 2011; 66(3):528-40.
Witthöft J, Caesar K, Elgass K, Huppenberger P, Kilian J, Schleifenbaum F, Oecking C, Harter K. The activation of the Arabidopsis P-ATPase 1 by the brassinosteroid receptor BRI1 is independent of threonine 948 phosphorylation. Plant Signal Behav. 2011; 6(7):1063-6.
Minami A, Takahashi K, Inoue SI, Tada Y, Kinoshita T. Brassinosteroid Induces Phosphorylation of the Plasma Membrane H+-ATPase during Hypocotyl Elongation in Arabidopsis thaliana.Plant Cell Physiol. 2019; 60(5):935-944.
Sánchez-Rodríguez C, Ketelaar K, Schneider R, Villalobos JA, Somerville CR, Persson S, Wallace IS. BRASSINOSTEROID INSENSITIVE2 negatively regulates cellulose synthesis in Arabidopsis by phosphorylating cellulose synthase 1. Proc Natl Acad Sci U S A. 2017; 114(13):3533-3538.
Wang X, Zhang J, Yuan M, Ehrhardt DW, Wang Z, Mao T. Arabidopsis microtubule destabilizing protein40 is involved in brassinosteroid regulation of hypocotyl elongation. Plant Cell. 2012; 24(10):4012-25
Chung Y, Maharjan PM, Lee O, Fujioka S, Jang S, Kim B, Takatsuto S, Tsujimoto M, Kim H, Cho S, Park T, Cho H, Hwang I, Choe S. Auxin stimulates DWARF4 expression and brassinosteroid biosynthesis in Arabidopsis. Plant J. 2011; 66: 564-578.
Yoshimitsu Y, Tanaka K, Fukuda W, Asami T, Yoshida S, Hayashi K, Kamiya Y, Jikumaru Y, Shigeta T, Nakamura Y, Matsuo T, Okamoto S. Transcription of DWARF4 plays a crucial role in auxin-regulated root elongation. PLoS One. 2011; 6:e23851.
Vert G, Walcher CL, Chory J, Nemhauser JL. Integration of auxin and brassinosteroid pathways by Auxin Response Factor 2. Proc Natl Acad Sci U S A. 2008; 105:9829-9834.
Schruff MC, Spielman M, Tiwari S, Adams S, Fenby N, Scott RJ. The AUXIN RESPONSE FACTOR 2 gene of Arabidopsis links auxin signalling, cell division, and the size of seeds and other organs. Development. 2006; 133:251-261
Sun Y, Fan XY, Cao DM, Tang W, He K, Zhu JY, He JX, Bai MY, Zhu S, Oh E, Patil S, Kim TW, Ji H, Wong WH, Rhee SY, Wang ZY. Integration of brassinosteroid signal transduction with the transcription network for plant growth regulation in Arabidopsis. Dev Cell. 2010; 19: 765-777
Haberlandt G. Ueber die Perception des geotropischen Reizes. Ber. Dtsch. Bot. Ges. 1900.;18, 261–272.
Žádníková P, Smet D, Zhu Q, Van Der Straeten D, Benková. Strategies of seedlings to overcome their sessile nature: auxin in mobility control. Front Plant Sci. 2015; 6:218.
Fujihira K, Kurata T, Watahiki MK, Karahara I, Yamamoto KT. An agravitropic mutant of Arabidopsis, endodermal-amyloplast less 1, that lacks amyloplasts in hypocotyl endodermal cell layer. Plant Cell Physiol. 2000;41(11):1193-9.
Fukaki H, Fujisawa H, Tasaka M. SGR1, SGR2, SGR3: novel genetic loci involved in shoot gravitropism in Arabidopsis thaliana. Plant Physiol. 1996;110(3):945-55.
Tasaka M, Kato T, Fukaki H. The endodermis and shoot gravitropism. Trends Plant Sci. 1999 ;4(3):103-7.
Caspar T, Pickard BG. Gravitropism in a starchless mutant of Arabidopsis : Implications for the starch-statolith theory of gravity sensing. Planta. 1989;177(2):185-97.
Vitha S, Yang M, Sack FD, Kiss JZ. Gravitropism in the starch excess mutant of Arabidopsis thaliana. Am J Bot. 2007;94(4):590-8.
Saito C, Morita MT, Kato T, Tasaka M. Amyloplasts and vacuolar membrane dynamics in the living graviperceptive cell of the Arabidopsis inflorescence stem. Plant Cell. 2005;17(2):548-58.
Kato T, Morita MT, Fukaki H, Yamauchi Y, Uehara M, Niihama M, Tasaka M. GR2, a phospholipase-like protein, and ZIG/SGR4, a SNARE, are involved in the shoot gravitropism of Arabidopsis. Plant Cell. 2002;14(1):33-46.
Hashiguchi Y, Tasaka M, Morita MT. Mechanism of higher plant gravity sensing. Am J Bot. 2013 ;100(1):91-100.
Rakusová H, Gallego-Bartolomé J, Vanstraelen M, Robert HS, Alabadí D, Blázquez MA, Benková E, Friml J. Polarization of PIN3-dependent auxin transport for hypocotyl gravitropic response in Arabidopsis thaliana. Plant J. 2011;67(5):817-26.
Rakusová H, Abbas M, Han H, Song S, Robert HS, Friml J. Termination of Shoot Gravitropic Responses by Auxin Feedback on PIN3 Polarity. Curr Biol. 2016;26(22):3026-3032.
Tatematsu K, Kumagai S, Muto H, Sato A, Watahiki MK, Harper RM, Liscum E, Yamamoto KT. MASSUGU2 encodes Aux/IAA19, an auxin-regulated protein that functions together with the transcriptional activator NPH4/ARF7 to regulate differential growth responses of hypocotyl and formation of lateral roots in Arabidopsis thaliana. Plant Cell. 2004; 16(2):379-93.
Fukaki H, Tameda S, Masuda H, Tasaka M. Lateral root formation is blocked by a gain-of-function mutation in the SOLITARY-ROOT/IAA14 gene of Arabidopsis. Plant J. 2002; 29(2):153-68.
Vieten A, Vanneste S, Wisniewska J, Benková E, Benjamins R, Beeckman T, Luschnig C, Friml J. Functional redundancy of PIN proteins is accompanied by auxin-dependent cross-regulation of PIN expression. Development. 2005;132(20):4521-31.
Sauer M, Balla J, Luschnig C, Wisniewska J, Reinöhl V, Friml J, Benková E. Canalization of auxin flow by Aux/IAA-ARF-dependent feedback regulation of PIN polarity. Genes Dev. 2006;20(20):2902-11.
Gupta A, Singh M, Jones AM, Laxmi A. Hypocotyl directional growth in Arabidopsis: a complex trait. Plant Physiol. 2012;159(4):1463-76.
Vandenbussche F, Suslov D, De Grauwe L, Leroux O, Vissenberg K, Van der Straeten D. The role of brassinosteroids in shoot gravitropism. Plant Physiol. 2011;156(3):1331-6.
第 2 章
Jaroensanti N, Yoon JM, Nakai Y, Shirai I, Otani M, Park SH, Hayashi K, Nakajima M, Asami T. Does the brassinosteroid signal pathway in photomorphogenesis overlap with the gravitropic response caused by auxin? Biosci Biotechnol Biochem. 2014;78(11):1839-49.
Robinson MD, McCarthy DJ, Smyth GK. edgeR: a Bioconductor package for differential expression analysis of digital gene expression data. Bioinformatics. 2010; 26:139-40.
第 3 章
Bessire M, Borel S, Fabre G, Carraça L, Efremova N, Yephremov A, Cao Y, Jetter
Bird D, Beisson F, Brigham A, Shin J, Greer S, Jetter R, Kunst L, Wu X, Yephremov A, Samuels L. Characterization of Arabidopsis ABCG11/WBC11, an ATP binding cassette (ABC) transporter that is required for cuticular lipid secretion. Plant J. 2007 ;52(3):485-98.
Fich EA, Segerson NA, Rose JK. The Plant Polyester Cutin: Biosynthesis, Structure, and Biological Roles. Annu Rev Plant Biol. 2016; 67:207-33.
Kannangara R, Branigan C, Liu Y, Penfield T, Rao V, Mouille G, Höfte H, Pauly M, Riechmann JL, Broun P. The transcription factor WIN1/SHN1 regulates Cutin biosynthesis in Arabidopsis thaliana. Plant Cell. 2007;19(4):1278-94.
Kurdyukov S, Faust A, Nawrath C, Bär S, Voisin D, Efremova N, Franke R, Schreiber L, Saedler H, Métraux JP, Yephremov A. The epidermis-specific extracellular BODYGUARD controls cuticle development and morphogenesis in Arabidopsis. Plant Cell. 2006;18(2):321-39.
Kurdyukov S, Faust A, Trenkamp S, Bär S, Franke R, Efremova N, Tietjen K, Schreiber L, Saedler H, Yephremov A. Genetic and biochemical evidence for involvement of HOTHEAD in the biosynthesis of long-chain alpha-,omega-dicarboxylic fatty acids and formation of extracellular matrix. Planta. 2006;224(2):315-29.
Li Y, Beisson F, Koo AJ, Molina I, Pollard M, Ohlrogge J. Identification of acyltransferases required for cutin biosynthesis and production of cutin with suberin-like monomers. Proc Natl Acad Sci U S A. 2007;104(46):18339-44.
Li-Beisson Y, Pollard M, Sauveplane V, Pinot F, Ohlrogge J, Beisson F. Nanoridges that characterize the surface morphology of flowers require the synthesis of cutin polyester. Proc Natl Acad Sci U S A. 2009;106(51):22008-13.
Li-Beisson Y, Shorrosh B, Beisson F, Andersson MX, Arondel V, Bates PD, Baud S, Bird D, Debono A, Durrett TP, Franke RB, Graham IA, Katayama K, Kelly AA, Larson T, Markham JE, Miquel M, Molina I, Nishida I, Rowland O, Samuels L, Schmid KM, Wada H, Welti R, Xu C, Zallot R, Ohlrogge J. Acyl-lipid metabolism. Arabidopsis Book. 2010; 8:e0133.
Lisso J, Schröder F, Schippers JH, Müssig C. NFXL2 modifies cuticle properties in Arabidopsis. Plant Signal Behav. 2012;7(5):551-5.
Liu YG, Mitsukawa N, Oosumi T, et al. Efficient isolation and mapping of Arabidopsis thaliana T-DNA insert junctions by thermal asymmetric interlaced PCR. Plant J. 1995; 8:457-63.
Lü S, Song T, Kosma DK, Parsons EP, Rowland O, Jenks MA. Arabidopsis CER8 encodes LONG-CHAIN ACYL-COA SYNTHETASE 1 (LACS1) that has overlapping functions with LACS2 in plant wax and cutin synthesis. Plant J. 2009; 59(4):553-64.
Lü S, Zhao H, Des Marais DL, Parsons EP, Wen X, Xu X, Bangarusamy DK, Wang G,
Panikashvili D, Shi JX, Schreiber L, Aharoni A. The Arabidopsis ABCG13 transporter is required for flower cuticle secretion and patterning of the petal epidermis. New Phytol. 2011;190(1):113-24.
Panikashvili D, Shi JX, Schreiber L, Aharoni A. The Arabidopsis DCR encoding a soluble BAHD acyltransferase is required for cutin polyester formation and seed hydration properties. Plant Physiol. 2009;151(4):1773-89.
R, Jacquat AC, Métraux JP, Nawrath C. A member of the PLEIOTROPIC DRUG RESISTANCE family of ATP binding cassette transporters is required for the formation of a functional cuticle in Arabidopsis. Plant Cell. 2011;23(5):1958-70.
Rani SH, Krishna TH, Saha S, Negi AS, Rajasekharan R. J Biol Chem. 2010; 285(49):38337-47.
Rowland O, Juenger T, Bressan RA, Jenks MA. Arabidopsis ECERIFERUM9 involvement in cuticle formation and maintenance of plant water status. Plant Physiol. 2012;159(3):930-44.
Sauveplane V, Kandel S, Kastner PE, Ehlting J, Compagnon V, Werck-Reichhart D, Pinot F. Arabidopsis thaliana CYP77A4 is the first cytochrome P450 able to catalyze the epoxidation of free fatty acids in plants. FEBS J. 2009;276(3):719-35.
Tanaka T, Tanaka H, Machida C, Watanabe M, Machida Y. A new method for rapid visualization of defects in leaf cuticle reveals five intrinsic patterns of surface defects in Arabidopsis. Plant J. 2004;37(1):139-46.
Trenkamp S, Martin W, Tietjen K. Specific and differential inhibition of very-long-chain fatty acid elongases from Arabidopsis thaliana by different herbicides. Proc Natl Acad Sci U S A. 2004; 101:11903-8.
Yeats TH, Martin LB, Viart HM, Isaacson T, He Y, Zhao L, Matas AJ, Buda GJ, Domozych DS, Clausen MH, Rose JK. The identification of cutin synthase: formation of the plant polyester cutin. Nat Chem Biol. 2012;8(7):609-11.
Yeats TH, Rose JK. The formation and function of plant cuticles. Plant Physiol. 2013;163(1):5-20.
Ziv C, Zhao Z, Gao YG, Xia Y. Multifunctional Roles of Plant Cuticle During Plant-Pathogen Interactions. Front Plant Sci. 2018;9:1088.
第 4 章
Bashline L, Lei L, Li S, Gu Y. Cell wall, cytoskeleton, and cell expansion in higher plants. Mol Plant. 2014 ;7(4):586-600.
Hama T, Seki K, Ishibashi A, Miyazaki A, Kouchi A, Watanabe N, Shimoaka T, Hasegawa T. Probing the Molecular Structure and Orientation of the Leaf Surface of Brassica oleracea L. by Polarization Modulation-Infrared Reflection-Absorption Spectroscopy, Plant and Cell Physiology. 2019, pcz063
Jacq A, Pernot C, Martinez Y, Domergue F, Payré B, Jamet E, Burlat V, Pacquit VB. The Arabidopsis Lipid Transfer Protein 2 (AtLTP2) Is Involved in Cuticle-Cell Wall Interface Integrity and in Etiolated Hypocotyl Permeability. Front Plant Sci. 2017;8:263.
Li Y, Smith C, Corke F, Zheng L, Merali Z, Ryden P, Derbyshire P, Waldron K, Bevan MW. Signaling from an altered cell wall to the nucleus mediates sugar-responsive growth and development in Arabidopsis thaliana. Plant Cell. 2007;19(8):2500-15.
Li-Beisson Y, Shorrosh B, Beisson F. Acyl-lipid metabolism. Arabidopsis Book. 2010;8:e0133.
Müller K, Levesque-Tremblay G, Fernandes A, Wormit A, Bartels S, Usadel B, Kermode A. Overexpression of a pectin methylesterase inhibitor in Arabidopsis thaliana leads to altered growth morphology of the stem and defective organ separation. Plant Signal Behav. 2013;8(12):e26464.
Park YB, Cosgrove DJ. Changes in cell wall biomechanical properties in the xyloglucan-deficient xxt1/xxt2 mutant of Arabidopsis. Plant Physiol. 2012;158(1):465-75.
Pelletier S, Van Orden J, Wolf S, Vissenberg K, Delacourt J, Ndong YA, Pelloux J, Bischoff V, Urbain A, Mouille G, Lemonnier G, Renou JP, Höfte H. A role for pectin de-methylesterification in a developmentally regulated growth acceleration in dark-grown Arabidopsis hypocotyls. New Phytol. 2010;188(3):726-39.
Refrégier G, Pelletier S, Jaillard D, Höfte H. Interaction between wall deposition and cell elongation in dark-grown hypocotyl cells in Arabidopsis. Plant Physiol. 2004;135(2):959-68.
Willats WG, McCartney L, Mackie W, Knox JP. Pectin: cell biology and prospects for functional analysis. Plant Mol Biol. 2001;47(1-2):9-27.
Wolf S, Mravec J, Greiner S, Mouille G, Höfte H. Plant cell wall homeostasis is mediated by brassinosteroid feedback signaling. Curr Biol. 2012;22(18):1732-7.
Wolf S, van der Does D, Ladwig F, Sticht C, Kolbeck A, Schürholz AK, Augustin S, Keinath N, Rausch T, Greiner S, Schumacher K, Harter K, Zipfel C, Höfte H. A receptor-like protein mediates the response to pectin modification by activating brassinosteroid signaling. Proc Natl Acad Sci U S A. 2014;111(42):15261-6.
Wormit A and Usadel B. The Multifaceted Role of Pectin Methylesterase Inhibitors (PMEIs). Int J Mol Sci. 2018;19(10).
Yeats TH, Somerville CR. A dual mechanism of cellulose deficiency in shv3svl1. Plant Signal Behav. 2016;11(9):e1218108. Yeats TH, Sorek H, Wemmer DE, Somerville CR. Cellulose Deficiency Is Enhanced on Hyper Accumulation of Sucrose by a H+-Coupled Sucrose Symporter. Plant Physiol. 2016;171(1):110-24.